RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 NEDD9Q14511 834 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 CCDC62Q6P9F0 684 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 FAM126BQ8IXS8 530 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 TMEM199Q8N511 208 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 UPF2Q9HAU5 1272 aaKnown RBP10.67□□□□□ -0.7
MRPL55-216ENST00000366744 RIC8AQ9NPQ8 531 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 TCEAL9Q9UHQ7 104 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
MRPL55-216ENST00000366744 SCN5AQ14524 2016 aa10.67□□□□□ -0.7
MRPL55-216ENST00000366744 GBF1Q92538 1859 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 SMCO2A6NFE2 343 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 MEIS2O14770 477 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 ZNF286BP0CG31 522 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 IFNAR1P17181 557 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 XBP1P17861 261 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PDIA3P30101 505 aaKnown RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PTPN11Q06124 597 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 SSRP1Q08945 709 aaKnown RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 FAAP100Q0VG06 881 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 STK3Q13188 491 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PPIGQ13427 754 aaKnown RBP eCLIP10.66□□□□□ -0.76e-7■■■■□ 20.4
MRPL55-216ENST00000366744 MTMR1Q13613 665 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 CELF3Q5SZQ8 465 aaKnown RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 C7orf31Q8N865 590 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 BADQ92934 168 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PHKBQ93100 1093 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 GPRASP2Q96D09 838 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 ZNF274Q96GC6 653 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 INPP4AQ96PE3 977 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PPP1R12CQ9BZL4 782 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 MTIF3Q9H2K0 278 aaKnown RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 HIPK3Q9H422 1215 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 TBX21Q9UL17 535 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 ZNF215Q9UL58 517 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PCDHA6Q9UN73 950 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 PCDHA8Q9Y5H6 950 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 LAMA3Q16787 3333 aa10.66□□□□□ -0.7
MRPL55-216ENST00000366744 ESYT2A0FGR8 921 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 TRIM43BA6NCK2 446 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 PRPF3O43395 683 aaKnown RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 SORBS3O60504 671 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 TIMP1P01033 207 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 ICAM3P32942 547 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 ZNF76P36508 570 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 CDK7P50613 346 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 EVCP57679 992 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 FUT2Q10981 343 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 TOB2Q14106 344 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 PSRC1Q6PGN9 363 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 METTL7BQ6UX53 244 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 TRIM43Q96BQ3 446 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 ANO3Q9BYT9 981 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 ALDH8A1Q9H2A2 487 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 NCOA5Q9HCD5 579 aaKnown RBP10.65□□□□□ -0.7
MRPL55-216ENST00000366744 RTEL1Q9NZ71 1219 aa10.65□□□□□ -0.7
MRPL55-216ENST00000366744 B4GALT4O60513 344 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 PPFIA4O75335 1185 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 RGS20O76081 388 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 DEXIO95424 95 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 F2P00734 622 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 NLRP5P59047 1200 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SETQ01105 290 aaPredicted RBP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SP4Q02446 784 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 BFSP2Q13515 415 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 MFSD10Q14728 455 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 KIAA0753Q2KHM9 967 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 MFSD5Q6N075 450 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SLC43A3Q8NBI5 491 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 WASF1Q92558 559 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 RNPC3Q96LT9 517 aaKnown RBP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SDF4Q9BRK5 362 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 ALG1Q9BT22 464 aa10.64□□□□□ -0.71
MRPL55-216ENST00000366744 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
MRPL55-216ENST00000366744 SPATA31C2B4DYI2 1134 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 MAFGO15525 162 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 CD4P01730 458 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 SREBF1P36956 1147 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 PSEN2P49810 448 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 PTGISQ16647 500 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 HSDL1Q3SXM5 330 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 CYFIP1Q7L576 1253 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 FAM177A1Q8N128 213 aaPredicted RBP10.63□□□□□ -0.71
MRPL55-216ENST00000366744 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 ZMYND12Q9H0C1 365 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 TRPV6Q9H1D0 765 aa10.63□□□□□ -0.71
MRPL55-216ENST00000366744 JPH1Q9HDC5 661 aaPredicted RBP10.63□□□□□ -0.71
MRPL55-216ENST00000366744 SH3GLB2Q9NR46 395 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms