RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 NFXL1Q6ZNB6 911 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 SGMS1Q86VZ5 419 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 MICU3Q86XE3 530 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 FBXL16Q8N461 479 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 PHOSPHO2Q8TCD6 241 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 DCAF4Q8WV16 495 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 FBXL18Q96ME1 805 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 MTA3Q9BTC8 594 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
MRPL55-211ENST00000366738 CPVLQ9H3G5 476 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 KAT14Q9H8E8 782 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 CFAP54Q96N23 3096 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 CACNA1HO95180 2353 aa9.48□□□□□ -0.89
MRPL55-211ENST00000366738 SCN10AQ9Y5Y9 1956 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 CCDC69A6NI79 296 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 ASB14A6NK59 587 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 GOLGA8BA8MQT2 603 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 ST18O60284 1047 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 DTNBO60941 627 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 MYL3P08590 195 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 SNHG28P0DPA3 235 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 ZNF543Q08ER8 600 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 STK3Q13188 491 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 ME3Q16798 604 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 CSPP1Q1MSJ5 1256 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 FAM47CQ5HY64 1035 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 SYDE2Q5VT97 1194 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.47□□□□□ -0.89
MRPL55-211ENST00000366738 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
MRPL55-211ENST00000366738 NID2Q14112 1375 aa9.47□□□□□ -0.89
MRPL55-211ENST00000366738 C5orf42Q9H799 3197 aa9.46□□□□□ -0.89
MRPL55-211ENST00000366738 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 DDAH1O94760 285 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 IQCF3P0C7M6 154 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 SUPT20HL2P0C7V6 817 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 GOLGA8HP0CJ92 632 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 RFC2P35250 354 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 ALDH5A1P51649 535 aaPredicted RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 EVCP57679 992 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 DEFB103AP81534 67 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 PURAQ00577 322 aaKnown RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 SCRN1Q12765 414 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 TROAPQ12815 778 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 LEXMQ3ZCV2 418 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 CCDC178Q5BJE1 867 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 PTCRAQ6ISU1 281 aaPredicted RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 NECAB1Q8N987 351 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.9
MRPL55-211ENST00000366738 SLC12A7Q9Y666 1083 aa9.46□□□□□ -0.9
MRPL55-211ENST00000366738 SIP14410 1827 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 TRIP12Q14669 1992 aaPredicted RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 GOLGA8AA7E2F4 631 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 ZBTB43O43298 467 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 DCXO43602 365 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 PPFIA3O75145 1194 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 PLEKHA8P1O95397 391 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 ALADP13716 330 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 EDNRBP24530 442 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 CALML3P27482 149 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 CDC27P30260 824 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 KCNJ6P48051 423 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 METAP2P50579 478 aaKnown RBP eCLIP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 RPS6P62753 249 aaKnown RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 CCT2P78371 535 aaKnown RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 GRM4Q14833 912 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 NBPF20Q3BBV1 942 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 DUSP28Q4G0W2 176 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 CATIPQ7Z7H3 387 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 COPS5Q92905 334 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 SNX21Q969T3 373 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 TMX3Q96JJ7 454 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 UBA5Q9GZZ9 404 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
MRPL55-211ENST00000366738 POLR3EQ9NVU0 708 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 MAD2L2Q9UI95 211 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 LIMCH1Q9UPQ0 1083 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 Q9Y3F1 56 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 MYO7AQ13402 2215 aa9.45□□□□□ -0.9
MRPL55-211ENST00000366738 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 H3BQ06 376 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-211ENST00000366738 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-211ENST00000366738 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms