RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 SLFN12Q8IYM2 578 aa26.92■■□□□ 1.9
CROCCP2-201ENST00000362058 MSL3Q8N5Y2 521 aaKnown RBP26.92■■□□□ 1.9
CROCCP2-201ENST00000362058 IDI2Q9BXS1 227 aa26.92■■□□□ 1.9
CROCCP2-201ENST00000362058 LACRTQ9GZZ8 138 aa26.92■■□□□ 1.9
CROCCP2-201ENST00000362058 FAM207AQ9NSI2 230 aaPredicted RBP26.92■■□□□ 1.9
CROCCP2-201ENST00000362058 NKRFO15226 690 aaKnown RBP eCLIP26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 RAD21O60216 631 aa26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 OAS2P29728 719 aaKnown RBP26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 CDC37Q16543 378 aaPredicted RBP26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 SECISBP2LQ93073 1101 aaKnown RBP26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 KCNMB3Q9NPA1 279 aa26.91■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L15C9J2P7 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L13C9JLJ4 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L11C9JVI0 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L18D6R9N7 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L22D6RA61 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L17D6RBQ6 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L19D6RCP7 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L20D6RJB6 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 NPM3O75607 178 aaKnown RBP26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L24Q0WX57 530 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 LRRC41Q15345 812 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 USP17L6PQ6QN14 398 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 C2CD5Q86YS7 1000 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 CEP63Q96MT8 703 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 MBOAT7Q96N66 472 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 TFR2Q9UP52 801 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 COL4A3BPQ9Y5P4 624 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 RCCD1A6NED2 376 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 SSBP05455 408 aaKnown RBP eCLIP26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 ZCWPW2Q504Y3 356 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 STRIP1Q5VSL9 837 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 WDR93Q6P2C0 686 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 COL23A1Q86Y22 540 aaPredicted RBP26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 NEK11Q8NG66 645 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 PKNOX2Q96KN3 472 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 DBNDD1Q9H9R9 158 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 HDAC6Q9UBN7 1215 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 KIAA1024Q9UPX6 916 aa26.9■■□□□ 1.9
CROCCP2-201ENST00000362058 LCA5LO95447 670 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 GNA14O95837 355 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 PLA2G4BP0C869 781 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 MCM3P25205 808 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 CYP27A1Q02318 531 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 NOA1Q8NC60 698 aaKnown RBP26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 DEF6Q9H4E7 631 aa26.89■■□□□ 1.9
CROCCP2-201ENST00000362058 TCP10Q12799 353 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 TMEM179Q6ZVK1 233 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 TXLNBQ8N3L3 684 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 FLAD1Q8NFF5 587 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 TRIM58Q8NG06 486 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 GJA10Q969M2 543 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 IFIH1Q9BYX4 1025 aaKnown RBP26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 ABCB6Q9NP58 842 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 ARHGAP20Q9P2F6 1191 aa26.89■■□□□ 1.89
CROCCP2-201ENST00000362058 TRAF5O00463 557 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 POLR3GO15318 223 aaPredicted RBP26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 EIF3JO75822 258 aaKnown RBP26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 KIF11P52732 1056 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 RBM5P52756 815 aaKnown RBP eCLIP26.88■■□□□ 1.894e-11■■■□□ 15.5
CROCCP2-201ENST00000362058 VSNL1P62760 191 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 CCDC40Q4G0X9 1142 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 HAUS3Q68CZ6 603 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 TATDN1Q6P1N9 297 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 KIAA0825Q8IV33 1275 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 TANGO6Q9C0B7 1094 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 L1RE1Q9UN81 338 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 PCDHA13Q9Y5I0 950 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 ATAD5Q96QE3 1844 aa26.88■■□□□ 1.89
CROCCP2-201ENST00000362058 DDTLA6NHG4 134 aaPredicted RBP26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 E9PMD0 336 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 ICA1Q05084 483 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 RRAGAQ7L523 313 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 GLIS3Q8NEA6 775 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 AMNQ9BXJ7 453 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 NUCKS1Q9H1E3 243 aaKnown RBP26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 FAM198AQ9UFP1 575 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 STK24Q9Y6E0 443 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 LRRC53A6NM62 1247 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 EPHB6O15197 1021 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 TACC1O75410 805 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 EIF4A3P38919 411 aaKnown RBP26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 IQCEQ6IPM2 695 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 CACNA2D4Q7Z3S7 1137 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 GPBP1Q86WP2 473 aa26.87■■□□□ 1.89
CROCCP2-201ENST00000362058 MACROD2A1Z1Q3 448 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 ZNF263O14978 683 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 TBX3O15119 743 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 AKR1B10O60218 316 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 PLEKP08567 350 aaPredicted RBP26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 MMP10P09238 476 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 CACNB3P54284 484 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 USP14P54578 494 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 PDXDC1Q6P996 788 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 GMCL1P1Q8NEA9 526 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 ERMNQ8TAM6 284 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 ZNF622Q969S3 477 aaKnown RBP eCLIP26.86■■□□□ 1.893e-8■□□□□ 11.3
CROCCP2-201ENST00000362058 AKT1S1Q96B36 256 aa26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 ZNF646O15015 1829 aaPredicted RBP26.86■■□□□ 1.89
CROCCP2-201ENST00000362058 PITPNM2Q9BZ72 1349 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms