RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CARSP49589 748 aaKnown RBP11.73□□□□□ -0.53
SMC3-201ENST00000361804 PDCLQ13371 301 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 MXD3Q9BW11 206 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 TLR10Q9BXR5 811 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 ZMYND12Q9H0C1 365 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 PLAGL2Q9UPG8 496 aa11.73□□□□□ -0.53
SMC3-201ENST00000361804 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
SMC3-201ENST00000361804 SLC16A2P36021 539 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 LIG3P49916 1009 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 CKAP4Q07065 602 aaKnown RBP11.72□□□□□ -0.53
SMC3-201ENST00000361804 KCNMA1Q12791 1236 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 PICALMQ13492 652 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 CCDC181Q5TID7 509 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 DDX12PQ92771 950 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 C7orf25Q9BPX7 421 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 ACBD3Q9H3P7 528 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 NFU1Q9UMS0 254 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 F8W031 263 aaPredicted RBP11.72□□□□□ -0.53
SMC3-201ENST00000361804 TLR2O60603 784 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 IVLP07476 585 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 IRAK1P51617 712 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
SMC3-201ENST00000361804 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 BAP1Q92560 729 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
SMC3-201ENST00000361804 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 TACC1O75410 805 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 BTDP43251 543 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 CCDC170Q8IYT3 715 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 SNX29Q8TEQ0 813 aa11.72□□□□□ -0.53
SMC3-201ENST00000361804 PARP14Q460N5 1801 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 BICDL2A1A5D9 508 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 GNGT1P63211 74 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 CALCRLQ16602 461 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 CENPPQ6IPU0 288 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 SV2BQ7L1I2 683 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 REXO1Q8N1G1 1221 aaKnown RBP11.71□□□□□ -0.53
SMC3-201ENST00000361804 ZHX3Q9H4I2 956 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 GAKO14976 1311 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
SMC3-201ENST00000361804 KLHDC7AQ5VTJ3 777 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 LARP4BQ92615 738 aaKnown RBP11.71□□□□□ -0.53
SMC3-201ENST00000361804 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 CDK5RAP3Q96JB5 506 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMC3-201ENST00000361804 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.53
SMC3-201ENST00000361804 PPP4CP60510 307 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.54
SMC3-201ENST00000361804 SOGA3Q5TF21 947 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 LRRC55Q6ZSA7 311 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 CALML4Q96GE6 196 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 VIPAS39Q9H9C1 493 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.54
SMC3-201ENST00000361804 TARSL2A2RTX5 802 aaKnown RBP11.71□□□□□ -0.54
SMC3-201ENST00000361804 ZEB2O60315 1214 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 PPFIA4O75335 1185 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 PALMO75781 387 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 ACTN1P12814 892 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 HGSNATQ68CP4 663 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 TRIM58Q8NG06 486 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 BCAS4Q8TDM0 211 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 ZIM3Q96PE6 472 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 NUP58Q9BVL2 599 aa11.71□□□□□ -0.54
SMC3-201ENST00000361804 E9PMD0 336 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 USO1O60763 962 aaKnown RBP11.7□□□□□ -0.54
SMC3-201ENST00000361804 KLRC1P26715 233 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 GUCY2DQ02846 1103 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 SLC30A10Q6XR72 485 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
SMC3-201ENST00000361804 GRIN2DO15399 1336 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 TRAF5O00463 557 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 GABPAQ06546 454 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 EHHADHQ08426 723 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 TEX11Q8IYF3 940 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 DAGLBQ8NCG7 672 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 EPB41L5Q9HCM4 733 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 ANO9A1A5B4 782 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 NOL4O94818 638 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 STAT3P40763 770 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 NOP2P46087 812 aaKnown RBP11.7□□□□□ -0.54
SMC3-201ENST00000361804 C8orf74Q6P047 294 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 KRT25Q7Z3Z0 450 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 FAM133AQ8N9E0 248 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
SMC3-201ENST00000361804 CCDC47Q96A33 483 aaKnown RBP11.7□□□□□ -0.54
SMC3-201ENST00000361804 CCDC43Q96MW1 224 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms