RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 PNMA2Q9UL42 364 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 TRIM49BA6NDI0 452 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 DKC1O60832 514 aaKnown RBP eCLIP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 URI1O94763 535 aaPredicted RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 PRPF6O94906 941 aaKnown RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 EPB41P11171 864 aaKnown RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 CYP2B6P20813 491 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 NOP2P46087 812 aaKnown RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 FMR1Q06787 632 aaKnown RBP eCLIP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 CYFIP1Q7L576 1253 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 RNF169Q8NCN4 708 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 NEK11Q8NG66 645 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 GSDMAQ96QA5 445 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 NACC1Q96RE7 527 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 FNBP1Q96RU3 617 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 MAP3K14Q99558 947 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 LUC7L2Q9Y383 392 aaKnown RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 COL4A3BPQ9Y5P4 624 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 USP54Q70EL1 1684 aa6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 COL22A1Q8NFW1 1626 aaPredicted RBP6.09□□□□□ -1.43
PCDH11X-202ENST00000361655 A0A0U1RQG5 324 aaPredicted RBP6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 GABPAQ06546 454 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 ADAM9Q13443 819 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 AXDND1Q5T1B0 1012 aaPredicted RBP6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 PPP1R18Q6NYC8 613 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 ATP6V0A1Q93050 837 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 GMCL1Q96IK5 515 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 LUC7LQ9NQ29 371 aaKnown RBP6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 LZTFL1Q9NQ48 299 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 ANKFY1Q9P2R3 1169 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 FBXO40Q9UH90 709 aa6.09□□□□□ -1.44
PCDH11X-202ENST00000361655 KCNJ18B7U540 433 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 DNM2P50570 870 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 KCNJ12Q14500 433 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CCDC150Q8NCX0 1101 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 SLC7A3Q8WY07 619 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 TIGD1Q96MW7 591 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 PPP1R9AQ9ULJ8 1098 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 ABCA3Q99758 1704 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 INO80B-WBP1J3KQ70 363 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 DLATP10515 647 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 YBX3P16989 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 USP11P51784 963 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 PEX3P56589 373 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 NCBP1Q09161 790 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 FKBP1CQ5VVH2 108 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 METTL16Q86W50 562 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CCDC112Q8NEF3 446 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 EIF2AK1Q9BQI3 630 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 INO80BQ9C086 356 aaPredicted RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 FAM49AQ9H0Q0 323 aaPredicted RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 NMRK2Q9NPI5 230 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 NRBP2Q9NSY0 501 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 MKRN1Q9UHC7 482 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 LAMB4A4D0S4 1761 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 GLTPD2A6NH11 291 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CALUO43852 315 aaPredicted RBP6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 ICAM1P05362 532 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 KRT9P35527 623 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 PRELPP51888 382 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 OSTNP61366 133 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 GNG11P61952 73 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 PTPAQ15257 358 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CLEC17AQ6ZS10 378 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 VPS36Q86VN1 386 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 CDHR1Q96JP9 859 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 FAM20AQ96MK3 541 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 LXNQ9BS40 222 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 SPC25Q9HBM1 224 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
PCDH11X-202ENST00000361655 HNRNPDLO14979 420 aaKnown RBP6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 CCP110O43303 1012 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 ZSCAN12O43309 604 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 ARP10275 920 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 TNNI1P19237 187 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 JAG1P78504 1218 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 RRP1BQ14684 758 aaKnown RBP6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 ARHGAP44Q17R89 818 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 SPATA1Q5VX52 437 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 MIS18BP1Q6P0N0 1132 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 FBXL16Q8N461 479 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 GMCL1P1Q8NEA9 526 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 CCDC42Q96M95 316 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 NLRP4Q96MN2 994 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 APOL6Q9BWW8 343 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 TRIM6Q9C030 488 aaPredicted RBP6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 EMILIN3Q9NT22 766 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 EP400Q96L91 3159 aa6.07□□□□□ -1.44
PCDH11X-202ENST00000361655 PDE4DIPQ5VU43 2346 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms