RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 EMID1Q96A84 441 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 ZSCAN16Q9H4T2 348 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 SPC25Q9HBM1 224 aa15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 KCNH7Q9NS40 1196 aa15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 DDX49Q9Y6V7 483 aaKnown RBP15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 CENPFP49454 3210 aa15.71■□□□□ 0.11
NSMCE1-201ENST00000361439 MCM3APO60318 1980 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 VPS37CA5D8V6 355 aaPredicted RBP15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 KIF28PB7ZC32 967 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 EDIL3O43854 480 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 SMPD1P17405 629 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 EARS2Q5JPH6 523 aaKnown RBP15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 CRISPLD2Q9H0B8 497 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 UPF3AQ9H1J1 476 aaKnown RBP15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
NSMCE1-201ENST00000361439 NFASCO94856 1347 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 TBX3O15119 743 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 CCNT1O60563 726 aaKnown RBP15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 SGPL1O95470 568 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 GH1P01241 217 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 GJA8P48165 433 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 GJA9P57773 515 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 BRDTQ58F21 947 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 PLA2G4DQ86XP0 818 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 TNS4Q8IZW8 715 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 ARRDC4Q8NCT1 418 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 CYP2W1Q8TAV3 490 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 LENG9Q96B70 501 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 ABHD8Q96I13 439 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 DEFB118Q96PH6 123 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 TBC1D22BQ9NU19 505 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 DDX25Q9UHL0 483 aaKnown RBP15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 OGDHLQ9ULD0 1010 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 MTMR6Q9Y217 621 aa15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
NSMCE1-201ENST00000361439 KIAA1217Q5T5P2 1943 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 ARIH2O95376 493 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 KCNA2P16389 499 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 UBA1P22314 1058 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 CST5P28325 142 aaPredicted RBP15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 SEMA3FQ13275 785 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 LY6KQ17RY6 165 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 PRR16Q569H4 304 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 CELF3Q5SZQ8 465 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 METTL7BQ6UX53 244 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 TLK2Q86UE8 772 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 ANKLE1Q8NAG6 615 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 FAM20AQ96MK3 541 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 RIT2Q99578 217 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 AP5M1Q9H0R1 490 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 XPNPEP3Q9NQH7 507 aa15.68■□□□□ 0.1
NSMCE1-201ENST00000361439 MYH7BA7E2Y1 1941 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 IPO5O00410 1097 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 ADCY6O43306 1168 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 ZEB2O60315 1214 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 CPT1AP50416 773 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 SP2Q02086 613 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 RNF180Q86T96 592 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 SLFN12Q8IYM2 578 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 PCSK9Q8NBP7 692 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 PPTC7Q8NI37 304 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 ZNF577Q9BSK1 485 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 TSEN34Q9BSV6 310 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 KCNMB3Q9NPA1 279 aa15.67■□□□□ 0.1
NSMCE1-201ENST00000361439 FAM205CA6NFA0 338 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 A6NJR5 290 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 LAD1O00515 517 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 DYNC1LI2O43237 492 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 KPNA6O60684 536 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ADAMTS4O75173 837 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 TDP2O95551 362 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 GGPS1O95749 300 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 BMP15O95972 392 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ARP10275 920 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 TTC38Q5R3I4 469 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 KLHDC9Q8NEP7 349 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ETNPPLQ8TBG4 499 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 SLC5A5Q92911 643 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 ZFP91Q96JP5 570 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 MLXIPQ9HAP2 919 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 SYNRGQ9UMZ2 1314 aa15.66■□□□□ 0.1
NSMCE1-201ENST00000361439 DNM1LO00429 736 aa15.65■□□□□ 0.1
NSMCE1-201ENST00000361439 MSH4O15457 936 aa15.65■□□□□ 0.1
NSMCE1-201ENST00000361439 NEMFO60524 1076 aa15.65■□□□□ 0.1
NSMCE1-201ENST00000361439 ATP9AO75110 1047 aa15.65■□□□□ 0.1
NSMCE1-201ENST00000361439 PPFIA4O75335 1185 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms