RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 NOVP48745 357 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 EZH2Q15910 746 aaKnown RBP17.93■□□□□ 0.46
IFT140-201ENST00000361339 KRT26Q7Z3Y9 468 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 KIAA0825Q8IV33 1275 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 COG1Q8WTW3 980 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 CAPS2Q9BXY5 557 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 JADE2Q9NQC1 790 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 MAGEC2Q9UBF1 373 aaPredicted RBP17.93■□□□□ 0.46
IFT140-201ENST00000361339 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
IFT140-201ENST00000361339 ADRA2BP18089 450 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 CCNE1P24864 410 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 OR8K1Q8NGG5 319 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 ZC3H12CQ9C0D7 883 aaKnown RBP17.92■□□□□ 0.46
IFT140-201ENST00000361339 THAP9Q9H5L6 903 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 AGPSO00116 658 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 LAD1O00515 517 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 TRIM21P19474 475 aaKnown RBP17.92■□□□□ 0.46
IFT140-201ENST00000361339 PDCLQ13371 301 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 MAP9Q49MG5 647 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 CCDC122Q5T0U0 273 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 CCDC51Q96ER9 411 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 C7orf25Q9BPX7 421 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 CD248Q9HCU0 757 aa17.92■□□□□ 0.46
IFT140-201ENST00000361339 NPHP3-ACAD11A0A0J9YXS1 232 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SHTN1A0MZ66 631 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 MACROD2A1Z1Q3 448 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 HSPA1LP34931 641 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 ZNF543Q08ER8 600 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 APOBEC3HQ6NTF7 200 aaKnown RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 SUGP1Q8IWZ8 645 aaKnown RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 SH2D3CQ8N5H7 860 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SNX29Q8TEQ0 813 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SMCR8Q8TEV9 937 aaPredicted RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 NOC4LQ9BVI4 516 aaKnown RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 SRGNP10124 158 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 EEF1GP26641 437 aaKnown RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 RNF187Q5TA31 235 aaPredicted RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 HDAC7Q8WUI4 952 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 HAS1Q92839 578 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 CRAMP1Q96RY5 1269 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 TTYH3Q9C0H2 523 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SMARCAL1Q9NZC9 954 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SSBP05455 408 aaKnown RBP eCLIP17.91■□□□□ 0.46
IFT140-201ENST00000361339 APBA1Q02410 837 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 AK8Q96MA6 479 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 P2RX7Q99572 595 aaKnown RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 DNAJC7Q99615 494 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 FAM207AQ9NSI2 230 aaPredicted RBP17.91■□□□□ 0.46
IFT140-201ENST00000361339 CAPN11Q9UMQ6 739 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SUFUQ9UMX1 484 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 ATP6V0A2Q9Y487 856 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 SAR1BQ9Y6B6 198 aa17.91■□□□□ 0.46
IFT140-201ENST00000361339 NDUFAB1O14561 156 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 CCDC172P0C7W6 258 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 SNHG28P0DPA3 235 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 CHRM1P11229 460 aaPredicted RBP17.9■□□□□ 0.46
IFT140-201ENST00000361339 CALML4Q96GE6 196 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 DDTLA6NHG4 134 aaPredicted RBP17.9■□□□□ 0.46
IFT140-201ENST00000361339 TTLL1O95922 423 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 STAT3P40763 770 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 KCTD19Q17RG1 926 aaPredicted RBP17.9■□□□□ 0.46
IFT140-201ENST00000361339 SLC30A10Q6XR72 485 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 SV2BQ7L1I2 683 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 KIAA1328Q86T90 577 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 SP8Q8IXZ3 490 aa17.9■□□□□ 0.46
IFT140-201ENST00000361339 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
IFT140-201ENST00000361339 DHTKD1Q96HY7 919 aaPredicted RBP17.9■□□□□ 0.46
IFT140-201ENST00000361339 ZNF263O14978 683 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 DNA2P51530 1060 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 AMPD2Q01433 879 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
IFT140-201ENST00000361339 DDX12PQ92771 950 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
IFT140-201ENST00000361339 PDE2AO00408 941 aaPredicted RBP17.89■□□□□ 0.45
IFT140-201ENST00000361339 WDR93Q6P2C0 686 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 JAKMIP2Q96AA8 810 aa17.89■□□□□ 0.45
IFT140-201ENST00000361339 SLF2Q8IX21 1173 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 COA1Q9GZY4 146 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 BCAS3Q9H6U6 928 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 E9PMD0 336 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 GDF11O95390 407 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 CPP00450 1065 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 CXCR5P32302 372 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 DNM2P50570 870 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 ASPRV1Q53RT3 343 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 OTUD6BQ8N6M0 293 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 ARL8AQ96BM9 186 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 NHEJ1Q9H9Q4 299 aaPredicted RBP17.88■□□□□ 0.45
IFT140-201ENST00000361339 DDX25Q9UHL0 483 aaKnown RBP17.88■□□□□ 0.45
IFT140-201ENST00000361339 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
IFT140-201ENST00000361339 RBM5P52756 815 aaKnown RBP eCLIP17.88■□□□□ 0.45
IFT140-201ENST00000361339 JAG1P78504 1218 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 ZNF622Q969S3 477 aaKnown RBP eCLIP17.88■□□□□ 0.45
IFT140-201ENST00000361339 CEP89Q96ST8 783 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
IFT140-201ENST00000361339 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
IFT140-201ENST00000361339 PNMA6FA0A0J9YX94 578 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms