RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
GDPD3-201ENST00000360688 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
GDPD3-201ENST00000360688 STOX1Q6ZVD7 989 aa17.5■□□□□ 0.39
GDPD3-201ENST00000360688 PDCD2LQ9BRP1 358 aa17.5■□□□□ 0.39
GDPD3-201ENST00000360688 MAD2L2Q9UI95 211 aa17.5■□□□□ 0.39
GDPD3-201ENST00000360688 RBAK-RBAKDNI3L0D1 243 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 ZBTB5O15062 677 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 LPXNO60711 386 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 MYCLP12524 364 aaPredicted RBP17.49■□□□□ 0.39
GDPD3-201ENST00000360688 HOXD8P13378 290 aaPredicted RBP17.49■□□□□ 0.39
GDPD3-201ENST00000360688 TRIM71Q2Q1W2 868 aaKnown RBP17.49■□□□□ 0.39
GDPD3-201ENST00000360688 MYSM1Q5VVJ2 828 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 CYB5R4Q7L1T6 521 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 WNT8BQ93098 351 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 ZBED2Q9BTP6 218 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
GDPD3-201ENST00000360688 PCDHA1Q9Y5I3 950 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 MICAL3Q7RTP6 2002 aa17.49■□□□□ 0.39
GDPD3-201ENST00000360688 ABHD14A-ACY1A0A1B0GW23 586 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
GDPD3-201ENST00000360688 HOXA13P31271 388 aaPredicted RBP17.48■□□□□ 0.39
GDPD3-201ENST00000360688 ZNF200P98182 395 aaPredicted RBP17.48■□□□□ 0.39
GDPD3-201ENST00000360688 HIC1Q14526 733 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 HSDL1Q3SXM5 330 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 CELF3Q5SZQ8 465 aaKnown RBP17.48■□□□□ 0.39
GDPD3-201ENST00000360688 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 IL31RAQ8NI17 732 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 RAPGEFL1Q9UHV5 662 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 COG5Q9UP83 839 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 SIP14410 1827 aa17.48■□□□□ 0.39
GDPD3-201ENST00000360688 SORBS3O60504 671 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 PPFIA4O75335 1185 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 GJB5O95377 273 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 GGPS1O95749 300 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 PGM5Q15124 567 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 SLC35G1Q2M3R5 365 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 ZNF618Q5T7W0 954 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 EXOC6Q8TAG9 804 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 EFCAB14O75071 495 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 SP2Q02086 613 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 IKBKEQ14164 716 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 HOMER1Q86YM7 354 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 GDPD5Q8WTR4 605 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
GDPD3-201ENST00000360688 SPATA33Q96N06 139 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 RAD9AQ99638 391 aa17.47■□□□□ 0.39
GDPD3-201ENST00000360688 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.39
GDPD3-201ENST00000360688 TGFB3P10600 412 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 UBA1P22314 1058 aaKnown RBP17.46■□□□□ 0.38
GDPD3-201ENST00000360688 GRM4Q14833 912 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.38
GDPD3-201ENST00000360688 HLA-CQ95604 372 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 PIGSQ96S52 555 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 RIOX1Q9H6W3 641 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 LMCD1Q9NZU5 365 aa17.46■□□□□ 0.38
GDPD3-201ENST00000360688 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 GCOM1H8Y6P7 765 aaPredicted RBP17.45■□□□□ 0.38
GDPD3-201ENST00000360688 LGR5O75473 907 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 POLR2MP0CAP2 368 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 CCND2P30279 289 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 ERVK-21P61565 698 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 TRDNQ13061 729 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 SERINC5Q86VE9 423 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 FCHSD1Q86WN1 690 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 SUGCTQ9HAC7 445 aa17.45■□□□□ 0.38
GDPD3-201ENST00000360688 CYTH3O43739 400 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 CYP21A2P08686 494 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
GDPD3-201ENST00000360688 TRAF1Q13077 416 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 FAM117BQ6P1L5 589 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
GDPD3-201ENST00000360688 BCAS3Q9H6U6 928 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 SENP2Q9HC62 589 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 MTUS1Q9ULD2 1270 aa17.44■□□□□ 0.38
GDPD3-201ENST00000360688 PNMA6FA0A0J9YX94 578 aa17.43■□□□□ 0.38
GDPD3-201ENST00000360688 IFIT3O14879 490 aaKnown RBP17.43■□□□□ 0.38
GDPD3-201ENST00000360688 HOXC8P31273 242 aa17.43■□□□□ 0.38
GDPD3-201ENST00000360688 THPOP40225 353 aa17.43■□□□□ 0.38
GDPD3-201ENST00000360688 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
GDPD3-201ENST00000360688 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
GDPD3-201ENST00000360688 DBF4BQ8NFT6 615 aa17.43■□□□□ 0.38
GDPD3-201ENST00000360688 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
GDPD3-201ENST00000360688 EMSYQ7Z589 1322 aa17.43■□□□□ 0.38
GDPD3-201ENST00000360688 KAT6AQ92794 2004 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 C17orf102A2RUQ5 167 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 RSPH10B2B2RC85 870 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 H3BRB1 525 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 RSPH10BP0C881 870 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 PDE4AP27815 886 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 MRPS9P82933 396 aaKnown RBP17.42■□□□□ 0.38
GDPD3-201ENST00000360688 PTH1RQ03431 593 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 TROAPQ12815 778 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
GDPD3-201ENST00000360688 ATP6V0A1Q93050 837 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms