RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 HSPA1LP34931 641 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 VAV2P52735 878 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 TDRD12Q587J7 1177 aaKnown RBP10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 FAM207AQ9NSI2 230 aaPredicted RBP10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 KIAA1024Q9UPX6 916 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 DNM3Q9UQ16 869 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 TBX3O15119 743 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 APBA3O96018 575 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 COASYQ13057 564 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 MKL1Q969V6 931 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 EEF2KMTQ96G04 330 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 SERPINA10Q9UK55 444 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 CETN3O15182 167 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 PLA2G4BP0C869 781 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 ARHGAP25P42331 645 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 STYK1Q6J9G0 422 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 FHOD1Q9Y613 1164 aa10.31□□□□□ -0.76
GTF3C2-202ENST00000359541 ECE2O60344 883 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 TBCAO75347 108 aaKnown RBP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 ZRANB2O95218 330 aaKnown RBP eCLIP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 CLK2P49760 499 aaKnown RBP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 NAP1L1P55209 391 aaKnown RBP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 SLC9C1Q4G0N8 1177 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 MXD3Q9BW11 206 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 ZNF446Q9NWS9 450 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 FANCGO15287 622 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 NFIAQ12857 509 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 LONRF2Q1L5Z9 754 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 CCDC181Q5TID7 509 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 SYDE2Q5VT97 1194 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 MTMR8Q96EF0 704 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 AGPAT5Q9NUQ2 364 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 HDAC9Q9UKV0 1011 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 ENTPD3O75355 529 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 BMP3P12645 472 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 RRAGAQ7L523 313 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 COL23A1Q86Y22 540 aaPredicted RBP10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 KCTD17Q8N5Z5 321 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 FAM20AQ96MK3 541 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 PLAGL2Q9UPG8 496 aa10.3□□□□□ -0.76
GTF3C2-202ENST00000359541 PITPNM2Q9BZ72 1349 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 SEC31AO94979 1220 aaKnown RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 SMC1AQ14683 1233 aaKnown RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 TERF2Q15554 542 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 PRR16Q569H4 304 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 HYIQ5T013 277 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 MSANTD4Q8NCY6 345 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 HPS3Q969F9 1004 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 F5H6K3 240 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 PLSCR1O15162 318 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 RPL13P26373 211 aaKnown RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 PAFAH1B1P43034 410 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 KLRC3Q07444 240 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 GMCL1P1Q8NEA9 526 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 TTYH3Q9C0H2 523 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 CALUO43852 315 aaPredicted RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 MAGEA1P43355 309 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 LRRC41Q15345 812 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 MIIPQ5JXC2 388 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 STXBP4Q6ZWJ1 553 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 PIAS4Q8N2W9 510 aaPredicted RBP10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 SH2D4AQ9H788 454 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
GTF3C2-202ENST00000359541 KIF11P52732 1056 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 IRX3P78415 501 aaPredicted RBP10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 USH1GQ495M9 461 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 SFMBT2Q5VUG0 894 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 TAF3Q5VWG9 929 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 WDR59Q6PJI9 974 aa10.28□□□□□ -0.76
GTF3C2-202ENST00000359541 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms