RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KDM1AO60341 852 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 PRPF6O94906 941 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 USP14P54578 494 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CCDC144BQ3MJ40 725 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SCYL1Q96KG9 808 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CHCHD3Q9NX63 227 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ANKFY1Q9P2R3 1169 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 AFG3L2Q9Y4W6 797 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 hCG_2014768A0A024R1R8 64 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 NSFP46459 744 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 RARS2Q5T160 578 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 TAF1DQ9H5J8 278 aaPredicted RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 PPME1Q9Y570 386 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 hCG_1642624A0A1W2PR95 340 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 BACH1O14867 736 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SESTD1Q86VW0 696 aa9.48□□□□□ -0.89
COL6A6-201ENST00000358511 CALR3Q96L12 384 aaKnown RBP9.48□□□□□ -0.89
COL6A6-201ENST00000358511 SCG2P13521 617 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 HADHQ16836 314 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 CCT8L2Q96SF2 557 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 FTOQ9C0B1 505 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 USP44Q9H0E7 712 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 HARSP12081 509 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 ACTN1P12814 892 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 EEF2KMTQ96G04 330 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 DONSONQ9NYP3 566 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 A0A0G2JND7 137 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 RASA4BC9J798 803 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 RASA4O43374 803 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 PLS3P13797 630 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 TECP42680 631 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 FKBP3Q00688 224 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 PTPN21Q16825 1174 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 CATSPER1Q8NEC5 780 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 FGGP02679 453 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 ANO5Q75V66 913 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 CEP152O94986 1710 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 DKC1O60832 514 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 SRGAP2O75044 1071 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 NUDCD3Q8IVD9 361 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 GSPT2Q8IYD1 628 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 SPATA5Q8NB90 893 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 GRAMD1AQ96CP6 724 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 WDR24Q96S15 920 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 USP40Q9NVE5 1235 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 MROH5Q6ZUA9 1318 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 MYO1FO00160 1098 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 DDAH1O94760 285 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 KAZNQ674X7 775 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 ATP7AQ04656 1500 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 WDR46O15213 610 aaKnown RBP9.47□□□□□ -0.89
COL6A6-201ENST00000358511 PPP1R37O75864 691 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 P4HA1P13674 534 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 ITGA6P23229 1130 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 SUCLG2Q96I99 432 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 NYXQ9GZU5 481 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
COL6A6-201ENST00000358511 NR2F2P24468 414 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 PDE6BP35913 854 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 CAV1Q03135 178 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 GCKRQ14397 625 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MESDQ14696 234 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 AP1M1Q9BXS5 423 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MT-ND3P03897 115 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MAFGO15525 162 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 CNGA3Q16281 694 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 NEK8Q86SG6 692 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 FAM133AQ8N9E0 248 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 KCNG1Q9UIX4 513 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 ARHGEF9O43307 516 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 FMNL1O95466 1100 aaPredicted RBP9.46□□□□□ -0.89
COL6A6-201ENST00000358511 LSP1P33241 339 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 PPARAQ07869 468 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MYH1P12882 1939 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 MYH4Q9Y623 1939 aa9.46□□□□□ -0.89
COL6A6-201ENST00000358511 ECE1P42892 770 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 LRRC63Q05C16 580 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 PPP2R5CQ13362 524 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 MCF2L2Q86YR7 1114 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 LARP4BQ92615 738 aaKnown RBP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TTC25Q96NG3 672 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 NBPF3Q9H094 633 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TAF5LO75529 589 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.9
COL6A6-201ENST00000358511 TNNI1P19237 187 aa9.46□□□□□ -0.9
COL6A6-201ENST00000358511 SERPINB10P48595 397 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms