RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 LRRC8CQ8TDW0 803 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TAB2Q9NYJ8 693 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RHOBTB3O94955 611 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CARD9Q9H257 536 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PABPC3Q9H361 631 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SPHKAPQ2M3C7 1700 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PLCB3Q01970 1234 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 WASHC2DQ5SRD0 308 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 HIBCHQ6NVY1 386 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MYOCDQ8IZQ8 938 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MYD88Q99836 296 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 KCND2Q9NZV8 630 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PAIP2BQ9ULR5 123 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 KRT15P19012 456 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ADD2P35612 726 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SFSWAPQ12872 951 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 EXOC8Q8IYI6 725 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF653Q96CK0 615 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CAPZA3Q96KX2 299 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 HAUS8Q9BT25 410 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TIPINQ9BVW5 301 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 KCNK9Q9NPC2 374 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PHF8Q9UPP1 1060 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SLC1A1P43005 524 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PTGISQ16647 500 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ZFYVE27Q5T4F4 411 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 IQCKQ8N0W5 287 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TMCO1Q9UM00 188 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RNF17Q9BXT8 1623 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PDE4DQ08499 809 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 IGDCC4Q8TDY8 1250 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 IQCGQ9H095 443 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ATP7AQ04656 1500 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 RNF8O76064 485 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 PAEPP09466 180 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TAP1Q03518 808 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 EDRF1Q3B7T1 1238 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 UNC5CLQ8IV45 518 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 SEC16BQ96JE7 1060 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TRAPPC9Q96Q05 1148 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CDCA7Q9BWT1 371 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 NRDE2Q9H7Z3 1164 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 ZCCHC17Q9NP64 241 aaKnown RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 TRIM33Q9UPN9 1127 aa4.47□□□□□ -1.69
SYNE2-204ENST00000358025 V9GY48 417 aaPredicted RBP4.47□□□□□ -1.69
SYNE2-204ENST00000358025 CALCRLQ16602 461 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 MAGEA13PA6NCF6 341 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 ZFAND2BQ8WV99 257 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 SIKE1Q9BRV8 207 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 TMOD4Q9NZQ9 345 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 MID2Q9UJV3 735 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 PCDH11XQ9BZA7 1347 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 MYO5CQ9NQX4 1742 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 CHGBP05060 677 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 PCCAP05165 728 aaPredicted RBP4.46□□□□□ -1.69
SYNE2-204ENST00000358025 SERPINB8P50452 374 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 PAPOLAP51003 745 aaKnown RBP4.46□□□□□ -1.69
SYNE2-204ENST00000358025 NONOQ15233 471 aaKnown RBP eCLIP4.46□□□□□ -1.69
SYNE2-204ENST00000358025 VGLL3A8MV65 326 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 DHX9Q08211 1270 aaKnown RBP4.46□□□□□ -1.69
SYNE2-204ENST00000358025 TFCP2Q12800 502 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 SUCLG2Q96I99 432 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 KDM6BO15054 1643 aa4.46□□□□□ -1.69
SYNE2-204ENST00000358025 MAP2P11137 1827 aaKnown RBP4.46□□□□□ -1.69
SYNE2-204ENST00000358025 SH2B2O14492 632 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 EIF4A3P38919 411 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 FRMD5Q7Z6J6 570 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SELENOSQ9BQE4 189 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.75e-6■■■□□ 16.3
SYNE2-204ENST00000358025 MARK3P27448 753 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 UBE4AQ14139 1066 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 G2E3Q7L622 706 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 NLRP14Q86W24 1093 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 CNPY3Q9BT09 278 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TOMM70O94826 608 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TJP3O95049 919 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 MAB21L3Q8N8X9 362 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ATXN2LQ8WWM7 1075 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SETD1BQ9UPS6 1966 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 B4E1Z4 1266 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 AP2B1P63010 937 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 DPYDQ12882 1025 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF513Q8N8E2 541 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 NYXQ9GZU5 481 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 EXOC7Q9UPT5 735 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ACTL7BQ9Y614 415 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 HMGB3O15347 200 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PJA2O43164 708 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 CALB2P22676 271 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 NCAPHQ15003 741 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PASD1Q8IV76 773 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF483Q8TF39 744 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 NUDCD1Q96RS6 583 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TRIM55Q9BYV6 548 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PLAAQ9Y263 795 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PFDN1O60925 122 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms