RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 HDAC7Q8WUI4 952 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 TXKP42681 527 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 PAK2Q13177 524 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 CD302Q8IX05 232 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 COL4A3BPQ9Y5P4 624 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 SBF2Q86WG5 1849 aa19.56■□□□□ 0.72
RTN4-204ENST00000357732 GRIN2DO15399 1336 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 ZPR1O75312 459 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 GOLGA8HP0CJ92 632 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 EZH2Q15910 746 aaKnown RBP19.55■□□□□ 0.72
RTN4-204ENST00000357732 ZCWPW2Q504Y3 356 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 MYOCDQ8IZQ8 938 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 TGFBRAP1Q8WUH2 860 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 GNPATO15228 680 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 CDK8P49336 464 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 PPP4R3AQ6IN85 833 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 DRC1Q96MC2 740 aa19.55■□□□□ 0.72
RTN4-204ENST00000357732 PLIN4Q96Q06 1357 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 BTNL10A8MVZ5 291 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 RPS6KA4O75676 772 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 NAB2Q15742 525 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 RC3H1Q5TC82 1133 aaKnown RBP19.54■□□□□ 0.72
RTN4-204ENST00000357732 ZNF804AQ7Z570 1209 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 AMIGO3Q86WK7 504 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 HPS3Q969F9 1004 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 MTMR8Q96EF0 704 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 CPVLQ9H3G5 476 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
RTN4-204ENST00000357732 PCDHGC5Q9Y5F6 944 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 NKRFO15226 690 aaKnown RBP eCLIP19.54■□□□□ 0.72
RTN4-204ENST00000357732 ADCY7P51828 1080 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 C10orf76Q5T2E6 689 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 BCAS4Q8TDM0 211 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 WHAMMQ8TF30 809 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 DDX12PQ92771 950 aa19.54■□□□□ 0.72
RTN4-204ENST00000357732 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
RTN4-204ENST00000357732 RTFDC1Q9BY42 306 aaPredicted RBP19.54■□□□□ 0.72
RTN4-204ENST00000357732 RBM12Q9NTZ6 932 aaKnown RBP19.54■□□□□ 0.72
RTN4-204ENST00000357732 NHSQ6T4R5 1651 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 ATP8B3O60423 1300 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 KDM3AQ9Y4C1 1321 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 SRRM3A6NNA2 597 aaPredicted RBP19.53■□□□□ 0.72
RTN4-204ENST00000357732 GNGT1P63211 74 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 RASSF7Q02833 373 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 GFPT1Q06210 699 aaPredicted RBP19.53■□□□□ 0.72
RTN4-204ENST00000357732 C10orf71Q711Q0 1435 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 B4GALNT4Q76KP1 1039 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 SNX29Q8TEQ0 813 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 ZBTB9Q96C00 473 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 GPR101Q96P66 508 aaPredicted RBP19.53■□□□□ 0.72
RTN4-204ENST00000357732 PIGSQ96S52 555 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
RTN4-204ENST00000357732 BIN2Q9UBW5 565 aaPredicted RBP19.53■□□□□ 0.72
RTN4-204ENST00000357732 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 MYH10P35580 1976 aa19.53■□□□□ 0.72
RTN4-204ENST00000357732 SLC1A4P43007 532 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 KCNMA1Q12791 1236 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 SLC18A3Q16572 532 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 TDRD12Q587J7 1177 aaKnown RBP19.52■□□□□ 0.72
RTN4-204ENST00000357732 HYIQ5T013 277 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 MAPKAPK5Q8IW41 473 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 IQCKQ8N0W5 287 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 NT5C3AQ9H0P0 336 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 SALL4Q9UJQ4 1053 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 FAM83BQ5T0W9 1011 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 USP17L2Q6R6M4 530 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 DYMQ7RTS9 669 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 PACS2Q86VP3 889 aa19.52■□□□□ 0.72
RTN4-204ENST00000357732 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 GCFC2P16383 781 aaKnown RBP19.51■□□□□ 0.71
RTN4-204ENST00000357732 CCT5P48643 541 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 SLC7A5Q01650 507 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 ICE2Q659A1 982 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 KDM7AQ6ZMT4 941 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 TSEN2Q8NCE0 465 aaKnown RBP19.51■□□□□ 0.71
RTN4-204ENST00000357732 TANGO6Q9C0B7 1094 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 AIPL1Q9NZN9 384 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 CXCR5P32302 372 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 MATR3P43243 847 aaKnown RBP eCLIP19.51■□□□□ 0.712e-7■■□□□ 13.8
RTN4-204ENST00000357732 CCDC40Q4G0X9 1142 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 TTMPQ5BVD1 217 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 CFAP58Q5T655 872 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 MEI1Q5TIA1 1274 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 SLF2Q8IX21 1173 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 PAGR1Q9BTK6 254 aa19.51■□□□□ 0.71
RTN4-204ENST00000357732 VGLL3A8MV65 326 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 COASYQ13057 564 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 NFIXQ14938 502 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 SUGP1Q8IWZ8 645 aaKnown RBP19.5■□□□□ 0.71
RTN4-204ENST00000357732 ZC3H3Q8IXZ2 948 aaKnown RBP19.5■□□□□ 0.71
RTN4-204ENST00000357732 DNAJC19Q96DA6 116 aa19.5■□□□□ 0.71
RTN4-204ENST00000357732 FAM163AQ96GL9 167 aaPredicted RBP19.5■□□□□ 0.71
RTN4-204ENST00000357732 ZFP91Q96JP5 570 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms