RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
NEIL1-201ENST00000355059 TBC1D7Q9P0N9 293 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 PCDHA4Q9UN74 947 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
NEIL1-201ENST00000355059 TADA3O75528 432 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 CAP2P40123 477 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 KRT83P78385 493 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 ARID5AQ03989 594 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 CCDC40Q4G0X9 1142 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 PAGE5Q96GU1 130 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
NEIL1-201ENST00000355059 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 ZBTB5O15062 677 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 MCM3P25205 808 aa12.35□□□□□ -0.43
NEIL1-201ENST00000355059 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
NEIL1-201ENST00000355059 SNRNP48Q6IEG0 339 aaKnown RBP12.35□□□□□ -0.43
NEIL1-201ENST00000355059 TRAF5O00463 557 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 COPB1P53618 953 aaKnown RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 HUNKP57058 714 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 AMPD3Q01432 767 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 CKAP4Q07065 602 aaKnown RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 PTPAQ15257 358 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 FAM114A1Q8IWE2 563 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 EHBP1Q8NDI1 1231 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 GSDMAQ96QA5 445 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 LUC7LQ9NQ29 371 aaKnown RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 BRD3Q15059 726 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 PIK3R5Q8WYR1 880 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 NOC4LQ9BVI4 516 aaKnown RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 PDS5AQ29RF7 1337 aaKnown RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 USP14P54578 494 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 CC2D1AQ6P1N0 951 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-201ENST00000355059 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
NEIL1-201ENST00000355059 ZMYND10O75800 440 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 TPH2Q8IWU9 490 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 PRPF38AQ8NAV1 312 aaKnown RBP12.33□□□□□ -0.43
NEIL1-201ENST00000355059 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 ALS2CR12Q96Q35 445 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 DDX25Q9UHL0 483 aaKnown RBP12.33□□□□□ -0.43
NEIL1-201ENST00000355059 GDAQ9Y2T3 454 aa12.33□□□□□ -0.43
NEIL1-201ENST00000355059 SIPA1L3O60292 1781 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-201ENST00000355059 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
NEIL1-201ENST00000355059 PCDHA12Q9UN75 941 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 EPN1Q9Y6I3 576 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-201ENST00000355059 TACC1O75410 805 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
NEIL1-201ENST00000355059 PTGER2P43116 358 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 TRIM14Q14142 442 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 SH3BP5LQ7L8J4 393 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 ERMNQ8TAM6 284 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 TSG101Q99816 390 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 IDI2Q9BXS1 227 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 PLEKHA4Q9H4M7 779 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 MRPL44Q9H9J2 332 aaKnown RBP12.33□□□□□ -0.44
NEIL1-201ENST00000355059 L2HGDHQ9H9P8 463 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 TJP1Q07157 1748 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
NEIL1-201ENST00000355059 PPARDQ03181 441 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 KRT31Q15323 416 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 SEPT14Q6ZU15 432 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 ZNF513Q8N8E2 541 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-201ENST00000355059 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 MEIS1O00470 390 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-201ENST00000355059 GAS7O60861 476 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 CACNB1Q02641 598 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-201ENST00000355059 REXO1L1PQ8IX06 675 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 TAF4BQ92750 862 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 JMJD4Q9H9V9 463 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 MFAP3LO75121 409 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 TDP2O95551 362 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 BIRC2Q13490 618 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 HLTFQ14527 1009 aaKnown RBP eCLIP12.32□□□□□ -0.44
NEIL1-201ENST00000355059 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 RNF146Q9NTX7 359 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
NEIL1-201ENST00000355059 CNTNAP5Q8WYK1 1306 aa12.31□□□□□ -0.44
NEIL1-201ENST00000355059 CCDC151A5D8V7 595 aa12.31□□□□□ -0.44
NEIL1-201ENST00000355059 CUL4BQ13620 913 aa12.31□□□□□ -0.44
NEIL1-201ENST00000355059 CABP7Q86V35 215 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms