RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 MRFAP1L1Q96HT8 127 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 DLG5Q8TDM6 1919 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 ENTPD3O75355 529 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 DNM2P50570 870 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 RCAN1P53805 252 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 PPARDQ03181 441 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 AGBL1Q96MI9 1066 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 INO80BQ9C086 356 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 FBXO2Q9UK22 296 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 GOLGA8IPA6NC78 632 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 GOLGA8JA6NMD2 632 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 TM4SF1P30408 202 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 SEC23AQ15436 765 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 JAKMIP2Q96AA8 810 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 IL1R1P14778 569 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 CDR1P51861 262 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 SLC7A3Q8WY07 619 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 IL17RBQ9NRM6 502 aa13.61□□□□□ -0.23
PCDHB11-201ENST00000354757 AKAP12Q02952 1782 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 TMED8Q6PL24 325 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 IMPACTQ9P2X3 320 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 FCER1AP12319 257 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 PRCPP42785 496 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 DMP1Q13316 513 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 CCDC50Q8IVM0 306 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 DYDC2Q96IM9 177 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 ZDHHC15Q96MV8 337 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 MYO1AQ9UBC5 1043 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 STXBP3O00186 592 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 IPO5O00410 1097 aaKnown RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 LRRN2O75325 713 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 ERCC5P28715 1186 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 HOXA10P31260 410 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 ATP2C1P98194 919 aaPredicted RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 TMTC1Q8IUR5 882 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 NACC1Q96RE7 527 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
PCDHB11-201ENST00000354757 PEX3P56589 373 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 IFIH1Q9BYX4 1025 aaKnown RBP13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 STK17AQ9UEE5 414 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 FKBP3Q00688 224 aaKnown RBP13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 BAATQ14032 418 aaPredicted RBP13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 SFMBT2Q5VUG0 894 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 ZNF710Q8N1W2 664 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 RBL2Q08999 1139 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 GRIPAP1Q4V328 841 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 NYAP2Q9P242 653 aa13.59□□□□□ -0.23
PCDHB11-201ENST00000354757 MRC1P22897 1456 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 BUB1O43683 1085 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 AP3B2Q13367 1082 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 NTRK3Q16288 839 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 KIAA0753Q2KHM9 967 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 ERCC6LQ2NKX8 1250 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 APOBEC3HQ6NTF7 200 aaKnown RBP13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 SFR1Q86XK3 245 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 TSPYL1Q9H0U9 437 aa13.58□□□□□ -0.23
PCDHB11-201ENST00000354757 OSBPP22059 807 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 CCNA1P78396 465 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 IFFO1Q0D2I5 559 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 DACT2Q5SW24 774 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 ENOX1Q8TC92 643 aaKnown RBP13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 ATG4CQ96DT6 458 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 TRIM14Q14142 442 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 SMC1AQ14683 1233 aaKnown RBP13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 EARS2Q5JPH6 523 aaKnown RBP13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 IFT81Q8WYA0 676 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.24
PCDHB11-201ENST00000354757 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 SPOPO43791 374 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 CCNE1P24864 410 aa13.57□□□□□ -0.24
PCDHB11-201ENST00000354757 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms