RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 CUL1Q13616 776 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 TMEM266Q2M3C6 531 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 CABS1Q96KC9 395 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 RNPC3Q96LT9 517 aaKnown RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 INPP4AQ96PE3 977 aaPredicted RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 NFU1Q9UMS0 254 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 FKBP3Q00688 224 aaKnown RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 EVX2Q03828 476 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 NAA35Q5VZE5 725 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 CERS3Q8IU89 383 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
CAPN9-202ENST00000354537 RAD54LQ92698 747 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 PBKQ96KB5 322 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 PNMA5Q96PV4 448 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 MKNK2Q9HBH9 465 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 AIPL1Q9NZN9 384 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 COL4A3BPQ9Y5P4 624 aa12.59□□□□□ -0.39
CAPN9-202ENST00000354537 COL4A1P02462 1669 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 PALMO75781 387 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 FAM107AO95990 144 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 ANXA13P27216 316 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 PPP4CP60510 307 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 IFI16Q16666 785 aaKnown RBP12.58□□□□□ -0.4
CAPN9-202ENST00000354537 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 ZNF473Q8WTR7 871 aaKnown RBP12.58□□□□□ -0.4
CAPN9-202ENST00000354537 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
CAPN9-202ENST00000354537 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
CAPN9-202ENST00000354537 KLRF2D3W0D1 207 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN9-202ENST00000354537 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
CAPN9-202ENST00000354537 BIRC3Q13489 604 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 KCNV1Q6PIU1 500 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 TAX1BP1Q86VP1 789 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
CAPN9-202ENST00000354537 SAMM50Q9Y512 469 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 CAPN7Q9Y6W3 813 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 GOLGA6L10A6NI86 522 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 KRT14P02533 472 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 FAM153BP0C7A2 387 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 GSTO1P78417 241 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 FAM153CQ494X1 144 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 NLRP14Q86W24 1093 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 TBCKQ8TEA7 893 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 CCT8L2Q96SF2 557 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
CAPN9-202ENST00000354537 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
CAPN9-202ENST00000354537 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 SMARCAL1Q9NZC9 954 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 EHD2Q9NZN4 543 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 FAM153AQ9UHL3 310 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 CCDC88AQ3V6T2 1871 aa12.57□□□□□ -0.4
CAPN9-202ENST00000354537 BUB1O43683 1085 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 TLR2O60603 784 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 NOL4O94818 638 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 MNAT1P51948 309 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 SMTNP53814 917 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ACTN3Q08043 901 aaPredicted RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 CALCRLQ16602 461 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 TDRD12Q587J7 1177 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 C6orf89Q6UWU4 347 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 RUFY4Q6ZNE9 571 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ZC3H3Q8IXZ2 948 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 MYCBPAPQ8TBZ2 947 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 IFT81Q8WYA0 676 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 TAF4BQ92750 862 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 MS4A14Q96JA4 679 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 BZW2Q9Y6E2 419 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 AGBL2Q5U5Z8 902 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 KRT79Q5XKE5 535 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
CAPN9-202ENST00000354537 SH2D3CQ8N5H7 860 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 SCFD2Q8WU76 684 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 PSMB7Q99436 277 aa12.56□□□□□ -0.4
CAPN9-202ENST00000354537 KRT12Q99456 494 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms