RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 KCNMB3Q9NPA1 279 aa4.13□□□□□ -1.75
RNF38-203ENST00000353739 FAM53CQ9NYF3 392 aa4.13□□□□□ -1.75
RNF38-203ENST00000353739 TCEAL9Q9UHQ7 104 aa4.13□□□□□ -1.75
RNF38-203ENST00000353739 FEM1BQ9UK73 627 aa4.13□□□□□ -1.75
RNF38-203ENST00000353739 MYH4Q9Y623 1939 aa4.13□□□□□ -1.75
RNF38-203ENST00000353739 B4DLN1 442 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GFPT2O94808 682 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 LCA5LO95447 670 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 APBA3O96018 575 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 FDX1P10109 184 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 RFX1P22670 979 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 CIITAP33076 1130 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SREBF1P36956 1147 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ATP2B2Q01814 1243 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ITIH3Q06033 890 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 IKQ13123 557 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 APOBEC3HQ6NTF7 200 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 FRMD5Q7Z6J6 570 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 MCF2L2Q86YR7 1114 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ZC3H3Q8IXZ2 948 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 RNF10Q8N5U6 811 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 CAGE1Q8TC20 777 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GPR101Q96P66 508 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 WDR11Q9BZH6 1224 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 NDST4Q9H3R1 872 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 NHEJ1Q9H9Q4 299 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 PCDHA1Q9Y5I3 950 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 RBBP6Q7Z6E9 1792 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 WTIPA6NIX2 430 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 CETN3O15182 167 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SERPING1P05155 500 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PLA2G4BP0C869 781 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 EPB41P11171 864 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 EEF2P13639 858 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 SCP2P22307 547 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GRIK5Q16478 980 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SLC9C1Q4G0N8 1177 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 NOM1Q5C9Z4 860 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 DACT2Q5SW24 774 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 CCDC122Q5T0U0 273 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ANKRD40Q6AI12 368 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 FBXO38Q6PIJ6 1188 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 RAD9BQ6WBX8 426 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PTF1AQ7RTS3 328 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GPBP1Q86WP2 473 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 LMBR1Q8WVP7 490 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PNMA5Q96PV4 448 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PSMD1Q99460 953 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 TANGO6Q9C0B7 1094 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 UBA5Q9GZZ9 404 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNF38-203ENST00000353739 LZTFL1Q9NQ48 299 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 F8W031 263 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 GCOM1H8Y6P7 765 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 WNT7AO00755 349 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 N4BP1O75113 896 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 MMP10P09238 476 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 POLR2MP0CAP2 368 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 STAT2P52630 851 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 MCM6Q14566 821 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 QRICH1Q2TAL8 776 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SFMBT2Q5VUG0 894 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 NIPA1Q7RTP0 329 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 COL23A1Q86Y22 540 aaPredicted RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 MTMR14Q8NCE2 650 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 CNKSR2Q8WXI2 1034 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 COA7Q96BR5 231 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 DUSP9Q99956 384 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 TMEM260Q9NX78 707 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GRID2IPA4D2P6 1211 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 BTNL10A8MVZ5 291 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 USP17L10C9JJH3 530 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 CES2O00748 559 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PDXKO00764 312 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 TCP1P17987 556 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 CLCN6P51797 869 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ASIC2Q16515 512 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 BMT2Q1RMZ1 405 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 GLE1Q53GS7 698 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 HSP90B2PQ58FF3 399 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 HSP90AA4PQ58FG1 418 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 PDXDC1Q6P996 788 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 DDX12PQ92771 950 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 MED15Q96RN5 788 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 MTRQ99707 1265 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 VIPAS39Q9H9C1 493 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 MRPL44Q9H9J2 332 aaKnown RBP4.12□□□□□ -1.75
RNF38-203ENST00000353739 KCNQ5Q9NR82 932 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 BLOC1S4Q9NUP1 217 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 KCNG1Q9UIX4 513 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 ODF2LQ9ULJ1 636 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SAR1BQ9Y6B6 198 aa4.12□□□□□ -1.75
RNF38-203ENST00000353739 SIPA1L1O43166 1804 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 FRMD3A2A2Y4 597 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 MYMKA6NI61 221 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 SMIM22K7EJ46 135 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 PJA2O43164 708 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 DKC1O60832 514 aaKnown RBP eCLIP4.11□□□□□ -1.75
RNF38-203ENST00000353739 TDP2O95551 362 aa4.11□□□□□ -1.75
RNF38-203ENST00000353739 EYA4O95677 639 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms