RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 UBE4AQ14139 1066 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 FAM98CQ17RN3 349 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 PRR16Q569H4 304 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 FAM83BQ5T0W9 1011 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 DUSP9Q99956 384 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 GCNT3O95395 438 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 ARL6IP4Q66PJ3 421 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 PHLDB2Q86SQ0 1253 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 OVOS2A0A0G2JMS6 1433 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 ITIH6Q6UXX5 1313 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 RGPD1P0DJD0 1748 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 DDX39AO00148 427 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 TBCAO75347 108 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 PRPF6O94906 941 aaKnown RBP19.84■□□□□ 0.77
CTSB-202ENST00000353047 PBX1P40424 430 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 NBPF9Q3BBW0 867 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 RETREG2Q8NC44 543 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 NUDT12Q9BQG2 462 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 ATP8A2Q9NTI2 1148 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 AMACRQ9UHK6 382 aa19.84■□□□□ 0.77
CTSB-202ENST00000353047 GBP2P32456 591 aaPredicted RBP19.83■□□□□ 0.77
CTSB-202ENST00000353047 CACNB3P54284 484 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 DHX9Q08211 1270 aaKnown RBP19.83■□□□□ 0.77
CTSB-202ENST00000353047 GIMAP8Q8ND71 665 aaPredicted RBP19.83■□□□□ 0.77
CTSB-202ENST00000353047 SEMA6BQ9H3T3 888 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 KCNK9Q9NPC2 374 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 PSD3Q9NYI0 1048 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 TCEAL9Q9UHQ7 104 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 PTPN22Q9Y2R2 807 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 RFC4P35249 363 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 CYP2J2P51589 502 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 AMPD2Q01433 879 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 ZYXQ15942 572 aaKnown RBP19.83■□□□□ 0.77
CTSB-202ENST00000353047 CEP95Q96GE4 821 aa19.83■□□□□ 0.77
CTSB-202ENST00000353047 GOLGB1Q14789 3259 aaKnown RBP19.83■□□□□ 0.76
CTSB-202ENST00000353047 GSTTP1A0A1W2PQM5 241 aa19.83■□□□□ 0.76
CTSB-202ENST00000353047 GFPT2O94808 682 aa19.83■□□□□ 0.76
CTSB-202ENST00000353047 LDHCP07864 332 aa19.83■□□□□ 0.76
CTSB-202ENST00000353047 CCDC65Q8IXS2 484 aa19.83■□□□□ 0.76
CTSB-202ENST00000353047 FNBP4Q8N3X1 1017 aaPredicted RBP19.83■□□□□ 0.76
CTSB-202ENST00000353047 THOC1Q96FV9 657 aaKnown RBP19.83■□□□□ 0.76
CTSB-202ENST00000353047 FMN2Q9NZ56 1722 aa19.83■□□□□ 0.76
CTSB-202ENST00000353047 POTEB3A0JP26 581 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 POTECB2RU33 542 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 POTEBQ6S5H4 581 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 ZNF34Q8IZ26 560 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 BRIP1Q9BX63 1249 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 CELF4Q9BZC1 486 aaKnown RBP19.82■□□□□ 0.76
CTSB-202ENST00000353047 SH2D4AQ9H788 454 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 DDX25Q9UHL0 483 aaKnown RBP19.82■□□□□ 0.76
CTSB-202ENST00000353047 ZNF263O14978 683 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 CLTAP09496 248 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 GTF2IP78347 998 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 NF2P35240 595 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 NAA25Q14CX7 972 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 MSL1Q68DK7 614 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 WDR93Q6P2C0 686 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 CD248Q9HCU0 757 aa19.82■□□□□ 0.76
CTSB-202ENST00000353047 PLTPP55058 493 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 TTBK2Q6IQ55 1244 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 ANKRD42Q8N9B4 389 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 SPATA20Q8TB22 786 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 TCP11Q8WWU5 503 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 DNAJC7Q99615 494 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 TMX4Q9H1E5 349 aaPredicted RBP19.81■□□□□ 0.76
CTSB-202ENST00000353047 PDS5AQ29RF7 1337 aaKnown RBP19.81■□□□□ 0.76
CTSB-202ENST00000353047 TAL1P17542 331 aaPredicted RBP19.81■□□□□ 0.76
CTSB-202ENST00000353047 HDLBPQ00341 1268 aaKnown RBP19.81■□□□□ 0.76
CTSB-202ENST00000353047 ITPK1Q13572 414 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 PPP1R7Q15435 360 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 MMS22LQ6ZRQ5 1243 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 OTUD6AQ7L8S5 288 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 RHOBTB3O94955 611 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 TBC1D9BQ66K14 1250 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 GJB7Q6PEY0 223 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 COL4A3BPQ9Y5P4 624 aa19.81■□□□□ 0.76
CTSB-202ENST00000353047 EIF3HO15372 352 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTSB-202ENST00000353047 DAPK3O43293 454 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 CYTH3O43739 400 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 FKBP3Q00688 224 aaKnown RBP19.8■□□□□ 0.76
CTSB-202ENST00000353047 SPICE1Q8N0Z3 855 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 KIAA0895Q8NCT3 520 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 ZNF622Q969S3 477 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTSB-202ENST00000353047 EFCC1Q9HA90 598 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 RTCBQ9Y3I0 505 aaKnown RBP19.8■□□□□ 0.76
CTSB-202ENST00000353047 A0A087X0T9 212 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 FAM228BP0C875 321 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 MDM1Q8TC05 714 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 SALL4Q9UJQ4 1053 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 STK38LQ9Y2H1 464 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 A0A1W2PQC6 194 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 RAD51CO43502 376 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 SLC37A4O43826 429 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 CDK8P49336 464 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 CREG2Q8IUH2 290 aa19.8■□□□□ 0.76
CTSB-202ENST00000353047 ARMCX3Q9UH62 379 aaPredicted RBP19.8■□□□□ 0.76
CTSB-202ENST00000353047 CCDC38Q502W7 563 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms