RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 CCDC194A0A1B0GVG4 234 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DAPK3O43293 454 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DNAJC8O75937 253 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 MMEP08473 750 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 C4AP0C0L4 1744 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 C4BP0C0L5 1744 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 FCER1AP12319 257 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 CCNE1P24864 410 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 HSPA9P38646 679 aaKnown RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 SSR1P43307 286 aaKnown RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 GRIK3Q13003 919 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PRPF4BQ13523 1007 aaKnown RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RAPGEF1Q13905 1077 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 SLC9C1Q4G0N8 1177 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 KIF2BQ8N4N8 673 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 CCT6BQ92526 530 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PRCCQ92733 491 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DHTKD1Q96HY7 919 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 XPO6Q96QU8 1125 aaKnown RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 KDM4CQ9H3R0 1056 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 NDST4Q9H3R1 872 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 LRP2BPQ9P2M1 347 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PIK3C2AO00443 1686 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 SMIM24O75264 130 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 KIF5BP33176 963 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 IFNL2Q8IZJ0 200 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 MREGQ8N565 214 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 MGARPQ8TDB4 240 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 TTYH3Q9C0H2 523 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 KRIT1O00522 736 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 NKRFO15226 690 aaKnown RBP eCLIP8.37□□□□□ -1.07
BRCA1-201ENST00000352993 EVI5O60447 810 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 STK4Q13043 487 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 MTMR3Q13615 1198 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 TAF11Q15544 211 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 IL17AQ16552 155 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 LRIG3Q6UXM1 1119 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 SDR42E1Q8WUS8 393 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 TBC1D5Q92609 795 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 P3H4Q92791 437 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 KLHL29Q96CT2 875 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 DUSP9Q99956 384 aaKnown RBP8.37□□□□□ -1.07
BRCA1-201ENST00000352993 ETAA1Q9NY74 926 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 ABCF2Q9UG63 623 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-201ENST00000352993 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
BRCA1-201ENST00000352993 ORC4O43929 436 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 CHN1P15882 459 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 KLRC1P26715 233 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 PCK1P35558 622 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 LONP1P36776 959 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 EPS15P42566 896 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 LACTBP83111 547 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 PKN1Q16512 942 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 VWA3BQ502W6 1294 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ZNF572Q7Z3I7 529 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SYNE4Q8N205 404 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 LCORLQ8N3X6 602 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NLRP3Q96P20 1036 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ISCUQ9H1K1 167 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 INTS9Q9NV88 658 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SLC12A6Q9UHW9 1150 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 AXIN2Q9Y2T1 843 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 MYH6P13533 1939 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 RTL9Q8NET4 1388 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SNUPNO95149 360 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 DRD4P21917 467 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 FLT3P36888 993 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 RWDD2BP57060 319 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 KCNJ2P63252 427 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ADCY2Q08462 1091 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 LACTB2Q53H82 288 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SFMBT2Q5VUG0 894 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 C3orf20Q8ND61 904 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 CCHCR1Q8TD31 782 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 TCP11L1Q9NUJ3 509 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ADAMTS1Q9UHI8 967 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 GOLGA6L10A0A0M3HER8 536 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 GSG1L2A8MUP6 293 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SNAP23O00161 211 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 NEFHP12036 1026 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 PHKG2P15735 406 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ITGA6P23229 1130 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 POLR2FP61218 127 aaKnown RBP8.36□□□□□ -1.07
BRCA1-201ENST00000352993 MXRA7P84157 204 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 ATP11AP98196 1134 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 CUL1Q13616 776 aa8.36□□□□□ -1.07
BRCA1-201ENST00000352993 UAP1Q16222 522 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms