RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KLHDC7AQ5VTJ3 777 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 PTF1AQ7RTS3 328 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 AMIGO3Q86WK7 504 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 GPIHBP1Q8IV16 184 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 RNF10Q8N5U6 811 aaKnown RBP27.13■■□□□ 1.93
CPNE1-202ENST00000352393 BBXQ8WY36 941 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-202ENST00000352393 COA7Q96BR5 231 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 HINFPQ9BQA5 517 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 FRMPD2Q68DX3 1309 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-202ENST00000352393 EMBQ6PCB8 327 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 CACNA2D4Q7Z3S7 1137 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 NOX5Q96PH1 765 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 PSMB7Q99436 277 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 CEP72Q9P209 647 aa27.13■■□□□ 1.93
CPNE1-202ENST00000352393 ARFGEF1Q9Y6D6 1849 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 ASPRV1Q53RT3 343 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 MYOCDQ8IZQ8 938 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 CAVIN3Q969G5 261 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 DNAJC19Q96DA6 116 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 TSKSQ9UJT2 592 aa27.12■■□□□ 1.93
CPNE1-202ENST00000352393 MYH7BA7E2Y1 1941 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 SLC7A5Q01650 507 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 RASSF7Q02833 373 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 COASYQ13057 564 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 SYN2Q92777 582 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-202ENST00000352393 PLEKHA4Q9H4M7 779 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 CD209Q9NNX6 404 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 COL4A3BPQ9Y5P4 624 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 PAFAH1B1P43034 410 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 MATR3P43243 847 aaKnown RBP eCLIP27.11■■□□□ 1.93
CPNE1-202ENST00000352393 SEPT2Q15019 361 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 PPP4R3AQ6IN85 833 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 PPP1R18Q6NYC8 613 aa27.11■■□□□ 1.93
CPNE1-202ENST00000352393 GOLGA8KD6RF30 607 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 TLR2O60603 784 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 NOL4O94818 638 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 SNHG28P0DPA3 235 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 CORO7P57737 925 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 ECM1Q16610 540 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 ARHGEF1Q92888 912 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 NUCKS1Q9H1E3 243 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 RBM12Q9NTZ6 932 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 GAKO14976 1311 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 ERCC3P19447 782 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 MRPS25P82663 173 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 FKBP3Q00688 224 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 GLE1Q53GS7 698 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 C8orf74Q6P047 294 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 TSEN2Q8NCE0 465 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 FAM163AQ96GL9 167 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 TANGO6Q9C0B7 1094 aa27.1■■□□□ 1.93
CPNE1-202ENST00000352393 RTCBQ9Y3I0 505 aaKnown RBP27.1■■□□□ 1.93
CPNE1-202ENST00000352393 EPB41P11171 864 aaKnown RBP27.09■■□□□ 1.93
CPNE1-202ENST00000352393 IL1R1P14778 569 aa27.09■■□□□ 1.93
CPNE1-202ENST00000352393 MAGEA9P43362 315 aa27.09■■□□□ 1.93
CPNE1-202ENST00000352393 GPSM2P81274 684 aa27.09■■□□□ 1.93
CPNE1-202ENST00000352393 PPFIA1Q13136 1202 aa27.09■■□□□ 1.93
CPNE1-202ENST00000352393 TDRD12Q587J7 1177 aaKnown RBP27.09■■□□□ 1.93
CPNE1-202ENST00000352393 MTMR4Q9NYA4 1195 aa27.09■■□□□ 1.93
CPNE1-202ENST00000352393 BUB1O43683 1085 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 SERPING1P05155 500 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 TNNI2P48788 182 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 SLC9C1Q4G0N8 1177 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 NNTQ13423 1086 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 FAM26FQ5R3K3 315 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 SFMBT2Q5VUG0 894 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 ALS2CLQ60I27 953 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 HAS1Q92839 578 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 CEP63Q96MT8 703 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 NLRC4Q9NPP4 1024 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 RNF14Q9UBS8 474 aa27.08■■□□□ 1.93
CPNE1-202ENST00000352393 OPA1O60313 960 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 CLK2P49760 499 aaKnown RBP27.07■■□□□ 1.92
CPNE1-202ENST00000352393 IRAK1P51617 712 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 CCDC40Q4G0X9 1142 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 FAM83BQ5T0W9 1011 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 GBP6Q6ZN66 633 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 LRRC47Q8N1G4 583 aaKnown RBP27.07■■□□□ 1.92
CPNE1-202ENST00000352393 C10orf71Q711Q0 1435 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 IGKV6D-41A0A0C4DH26 115 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 FAM98CQ17RN3 349 aaKnown RBP27.07■■□□□ 1.92
CPNE1-202ENST00000352393 CFAP221Q4G0U5 840 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 HYIQ5T013 277 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 TMC4Q7Z404 712 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 LSM14BQ9BX40 385 aaKnown RBP27.07■■□□□ 1.92
CPNE1-202ENST00000352393 PODXL2Q9NZ53 605 aa27.07■■□□□ 1.92
CPNE1-202ENST00000352393 KIF13BQ9NQT8 1826 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 GRIN2DO15399 1336 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 TRAF5O00463 557 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 MARSP56192 900 aaKnown RBP27.06■■□□□ 1.92
CPNE1-202ENST00000352393 UBE2SQ16763 222 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 PANK4Q9NVE7 773 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 DDX25Q9UHL0 483 aaKnown RBP27.06■■□□□ 1.92
CPNE1-202ENST00000352393 ATP6V0A2Q9Y487 856 aa27.06■■□□□ 1.92
CPNE1-202ENST00000352393 PPP1R11O60927 126 aaPredicted RBP27.05■■□□□ 1.92
CPNE1-202ENST00000352393 UFL1O94874 794 aa27.05■■□□□ 1.92
CPNE1-202ENST00000352393 DNAJC21Q5F1R6 531 aaKnown RBP27.05■■□□□ 1.92
CPNE1-202ENST00000352393 TRIM59Q8IWR1 403 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms