RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 RCAN1P53805 252 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ZBED6P86452 979 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 LRRC41Q15345 812 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 GPKOWQ92917 476 aaPredicted RBP eCLIP16.65■□□□□ 0.26
PTBP1-201ENST00000349038 DNAJC7Q99615 494 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 GREM2Q9H772 168 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 LRRC10BA6NIK2 292 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-201ENST00000349038 CCDC197Q8NCU1 140 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 CABLES1Q8TDN4 633 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ATP6V0A4Q9HBG4 840 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ADAMTS1Q9UHI8 967 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 TRIM37O94972 964 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 RNASELQ05823 741 aaKnown RBP16.65■□□□□ 0.26
PTBP1-201ENST00000349038 RAPGEF1Q13905 1077 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 RBBP5Q15291 538 aaKnown RBP16.65■□□□□ 0.26
PTBP1-201ENST00000349038 KIAA0753Q2KHM9 967 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ANKRD40Q6AI12 368 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 CCDC50Q8IVM0 306 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 ANKS4BQ8N8V4 417 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 LPIN2Q92539 896 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 MTA3Q9BTC8 594 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 PACSIN1Q9BY11 444 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 TBC1D7Q9P0N9 293 aa16.65■□□□□ 0.26
PTBP1-201ENST00000349038 CHD4Q14839 1912 aa16.64■□□□□ 0.26
PTBP1-201ENST00000349038 GSG1L2A8MUP6 293 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 SHBGP04278 402 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 MRPL12P52815 198 aaKnown RBP16.64■□□□□ 0.25
PTBP1-201ENST00000349038 POLE2P56282 527 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 CCDC25Q86WR0 208 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 ZHX3Q9H4I2 956 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 GTPBP6O43824 516 aaPredicted RBP16.64■□□□□ 0.25
PTBP1-201ENST00000349038 PDE8BO95263 885 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 PPP2R2AP63151 447 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 LONP2Q86WA8 852 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 ERICH1Q86X53 443 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 ANKRD42Q8N9B4 389 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 ABCF3Q9NUQ8 709 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 SLAIN2Q9P270 581 aa16.64■□□□□ 0.25
PTBP1-201ENST00000349038 MMEP08473 750 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 ATF3P18847 181 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-201ENST00000349038 TAF11Q15544 211 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 SH3GL3Q99963 347 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 MTFR1LQ9H019 292 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 SAMD15Q9P1V8 674 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 RANBP1P43487 201 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
PTBP1-201ENST00000349038 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 KLHL29Q96CT2 875 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 NEUROG2Q9H2A3 272 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 RTN2O75298 545 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 IGHMBP2P38935 993 aaKnown RBP16.63■□□□□ 0.25
PTBP1-201ENST00000349038 INHBEP58166 350 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 STK4Q13043 487 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
PTBP1-201ENST00000349038 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
PTBP1-201ENST00000349038 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
PTBP1-201ENST00000349038 FOXO6A8MYZ6 492 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TRAPPC3O43617 180 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 NMT2O60551 498 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 KLRC1P26715 233 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 CTSWP56202 376 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 ZNF844Q08AG5 666 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 USP4Q13107 963 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 KLHDC7AQ5VTJ3 777 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 FERMT2Q96AC1 680 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 PRMT1Q99873 361 aaKnown RBP16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TSGA10Q9BZW7 698 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 A6NNZ2 444 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 EPB41P11171 864 aaKnown RBP16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TUBB8Q3ZCM7 444 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TMTC2Q8N394 836 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
PTBP1-201ENST00000349038 RNF26Q9BY78 433 aaPredicted RBP16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TMBIM4Q9HC24 238 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 C15orf41Q9Y2V0 281 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 TNKSO95271 1327 aa16.62■□□□□ 0.25
PTBP1-201ENST00000349038 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-201ENST00000349038 CHN1P15882 459 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 MXRA7P84157 204 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 DAAM2Q86T65 1068 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 LRRC34Q8IZ02 419 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 RMND1Q9NWS8 449 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 LRP2BPQ9P2M1 347 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 RASSF10A6NK89 507 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 ITGA4P13612 1032 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 FGFR2P21802 821 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 C6orf89Q6UWU4 347 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
PTBP1-201ENST00000349038 ZNF570Q96NI8 536 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms