RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 APPP05067 770 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 SLC16A2P36021 539 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
MRPL55-204ENST00000348259 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
MRPL55-204ENST00000348259 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 ARHGAP1Q07960 439 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
MRPL55-204ENST00000348259 MBTPS1Q14703 1052 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 SYDE2Q5VT97 1194 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
MRPL55-204ENST00000348259 CHMP4CQ96CF2 233 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 AGXT2Q9BYV1 514 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 TCP11L1Q9NUJ3 509 aa11.26□□□□□ -0.61
MRPL55-204ENST00000348259 POTEB3A0JP26 581 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 TSPY2A6NKD2 308 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 E7EWF7 191 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 HAS3O00219 553 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 ZNF213O14771 459 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 SLC3A2P08195 630 aaKnown RBP11.25□□□□□ -0.61
MRPL55-204ENST00000348259 MMP3P08254 477 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 HOXD8P13378 290 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-204ENST00000348259 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
MRPL55-204ENST00000348259 SELPP16109 830 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 NUCB2P80303 420 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 CNKSR3Q6P9H4 555 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 POTEBQ6S5H4 581 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 RGS22Q8NE09 1264 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 NEK9Q8TD19 979 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
MRPL55-204ENST00000348259 WNT8BQ93098 351 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 RAD9AQ99638 391 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 ANP32EQ9BTT0 268 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 MAF1Q9H063 256 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 GTF2IRD1Q9UHL9 959 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 TAF6LQ9Y6J9 622 aa11.25□□□□□ -0.61
MRPL55-204ENST00000348259 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 TXNP10599 105 aaKnown RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 PDHBP11177 359 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 CKBP12277 381 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 HTRA4P83105 476 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 PTGISQ16647 500 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 CLEC17AQ6ZS10 378 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 STOX1Q6ZVD7 989 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 LRRC8DQ7L1W4 858 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 GJD3Q8N144 294 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 AFG1LQ8WV93 481 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 TGS1Q96RS0 853 aaKnown RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 FTOQ9C0B1 505 aaKnown RBP eCLIP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.24□□□□□ -0.61
MRPL55-204ENST00000348259 DMDP11532 3685 aa11.24□□□□□ -0.61
MRPL55-204ENST00000348259 CFAP54Q96N23 3096 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 TECTAO75443 2155 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 GRXCR2A6NFK2 248 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 F2P00734 622 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
MRPL55-204ENST00000348259 CPA1P15085 419 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 IL9P15248 144 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 CALML3P27482 149 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 KCNJ6P48051 423 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 EVCP57679 992 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 PDE4DQ08499 809 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 TOB2Q14106 344 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-204ENST00000348259 HIC1Q14526 733 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 BRDTQ58F21 947 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-204ENST00000348259 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
MRPL55-204ENST00000348259 ISY1Q9ULR0 285 aaKnown RBP11.23□□□□□ -0.61
MRPL55-204ENST00000348259 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 EFCAB14O75071 495 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 HOXC8P31273 242 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 NT5C2P49902 561 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 GHRHRQ02643 423 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 NFKBIBQ15653 356 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-204ENST00000348259 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
MRPL55-204ENST00000348259 CCDC155Q8N6L0 562 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 NCOA7Q8NI08 942 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 MYO15AQ9UKN7 3530 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
MRPL55-204ENST00000348259 RANBP6O60518 1105 aaKnown RBP11.21□□□□□ -0.61
MRPL55-204ENST00000348259 GH1P01241 217 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms