RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
UBE3C-201ENST00000348165 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.29■□□□□ 0.84
UBE3C-201ENST00000348165 NEDD4P46934 1319 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 BPIFB4P59827 614 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 OSTNP61366 133 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 PDXDC2PQ6P474 469 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 AFG3L2Q9Y4W6 797 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 ZNF131P52739 623 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 TOB2Q14106 344 aaPredicted RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 LLGL1Q15334 1064 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 EP400NLQ6ZTU2 488 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 SDCCAG8Q86SQ7 713 aaPredicted RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 STMN2Q93045 179 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 MIS12Q9H081 205 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 BHMT2Q9H2M3 363 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 TPD52P55327 224 aaPredicted RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 SMIM5Q71RC9 77 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 NBPF26B4DH59 902 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 NBPF10Q6P3W6 841 aaKnown RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 NME8Q8N427 588 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 NBPF15Q8N660 670 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 FAM149B1Q96BN6 582 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 DDX23Q9BUQ8 820 aaKnown RBP20.28■□□□□ 0.84
UBE3C-201ENST00000348165 PARVGQ9HBI0 331 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 SEPT10Q9P0V9 454 aa20.28■□□□□ 0.84
UBE3C-201ENST00000348165 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 BFSP1Q12934 665 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 SEPT6Q14141 434 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 CYB5R4Q7L1T6 521 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 ISCA1Q9BUE6 129 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 PAGE5Q96GU1 130 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
UBE3C-201ENST00000348165 SLC35F6Q8N357 371 aa20.27■□□□□ 0.84
UBE3C-201ENST00000348165 NXF1Q9UBU9 619 aaKnown RBP20.27■□□□□ 0.84
UBE3C-201ENST00000348165 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.84
UBE3C-201ENST00000348165 BZW2Q9Y6E2 419 aaKnown RBP20.27■□□□□ 0.84
UBE3C-201ENST00000348165 CCNE1P24864 410 aa20.27■□□□□ 0.83
UBE3C-201ENST00000348165 PODNQ7Z5L7 613 aa20.27■□□□□ 0.83
UBE3C-201ENST00000348165 SLC17A8Q8NDX2 589 aa20.27■□□□□ 0.83
UBE3C-201ENST00000348165 SLC10A4Q96EP9 437 aa20.27■□□□□ 0.83
UBE3C-201ENST00000348165 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
UBE3C-201ENST00000348165 SEPT2Q15019 361 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 BRD3Q15059 726 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
UBE3C-201ENST00000348165 PPP2R5EQ16537 467 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 I3L4J1 428 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 ITKQ08881 620 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 ZBTB33Q86T24 672 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 GSDMBQ8TAX9 411 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 CHD1O14646 1710 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 LMNB1P20700 586 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 PLCB1Q9NQ66 1216 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 HAUS2Q9NVX0 235 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 CDHR2Q9BYE9 1310 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 SFI1A8K8P3 1242 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 THAP12O43422 761 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 CIB2O75838 187 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 ABI1Q8IZP0 508 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 CACTINQ8WUQ7 758 aaKnown RBP20.26■□□□□ 0.83
UBE3C-201ENST00000348165 ANKRD36BP1Q96IX9 119 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 TMEM206Q9H813 350 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 TET3O43151 1660 aa20.26■□□□□ 0.83
UBE3C-201ENST00000348165 PSDA5PKW4 1024 aaPredicted RBP20.25■□□□□ 0.83
UBE3C-201ENST00000348165 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
UBE3C-201ENST00000348165 DDIT3P35638 169 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 GKAP1Q5VSY0 366 aaPredicted RBP20.25■□□□□ 0.83
UBE3C-201ENST00000348165 PPFIBP2Q8ND30 876 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 ENOX1Q8TC92 643 aaKnown RBP20.25■□□□□ 0.83
UBE3C-201ENST00000348165 GRK7Q8WTQ7 553 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 A6NNZ2 444 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 ECE2O60344 883 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 NEDD9Q14511 834 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 TUBB8Q3ZCM7 444 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 XPOTO43592 962 aaKnown RBP20.25■□□□□ 0.83
UBE3C-201ENST00000348165 FAM83BQ5T0W9 1011 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 KSR1Q8IVT5 923 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 ATP2A3Q93084 1043 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 ZNF653Q96CK0 615 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 GOLGA8SH3BPF8 625 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 MYL1P05976 194 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 MARK3P27448 753 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 STX2P32856 288 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 P3H4Q92791 437 aa20.25■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 GFPT2O94808 682 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
UBE3C-201ENST00000348165 USP17L6PQ6QN14 398 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms