RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 LIG3P49916 1009 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ATG16L1Q676U5 607 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 GAS7O60861 476 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 PABPC4Q13310 644 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAF3-201ENST00000347662 TTC38Q5R3I4 469 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 EFHD1Q9BUP0 239 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 CREB3O43889 395 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 TCF3P15923 654 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 F8W8V4 182 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 NBNO60934 754 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ATF2P15336 505 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 PDE6CP51160 858 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 LMNB2Q03252 620 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 KRIT1O00522 736 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 NCF2P19878 526 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-201ENST00000347662 MAGEA1P43355 309 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 MYL5Q02045 173 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 MECOMQ03112 1051 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ARHGEF6Q15052 776 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 CHCHD3Q9NX63 227 aaKnown RBP12.78□□□□□ -0.36
TRAF3-201ENST00000347662 LARSQ9P2J5 1176 aaKnown RBP12.78□□□□□ -0.36
TRAF3-201ENST00000347662 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 HYOU1Q9Y4L1 999 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
TRAF3-201ENST00000347662 WDR64B1ANS9 1081 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 E7EWF7 191 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 KCNK3O14649 394 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 ANGPT1Q15389 498 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 TSC22D1Q15714 1073 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 INTUQ9ULD6 942 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 LRRD1A4D1F6 860 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 CFLARO15519 480 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 ANP32DO95626 131 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 CCDC159P0C7I6 412 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 GNPTABQ3T906 1256 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 OSBPL10Q9BXB5 764 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 SGSM2O43147 1006 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 ATP5JP18859 108 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 MAP2K2P36507 400 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 ATP1A2P50993 1020 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 MAP10Q9P2G4 905 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.36
TRAF3-201ENST00000347662 PALD1Q9ULE6 856 aa12.77□□□□□ -0.36
TRAF3-201ENST00000347662 HADHAP40939 763 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 POLGP54098 1239 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-201ENST00000347662 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-201ENST00000347662 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 TYW1Q9NV66 732 aaKnown RBP12.77□□□□□ -0.37
TRAF3-201ENST00000347662 LRWD1Q9UFC0 647 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 M0R2C6 588 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 OCRLQ01968 901 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 C16orf72Q14CZ0 275 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 PLEKHM3Q6ZWE6 761 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 PNMA1Q8ND90 353 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 PPP1R14AQ96A00 147 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
TRAF3-201ENST00000347662 KDM5CP41229 1560 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 GDF11O95390 407 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 PATL1Q86TB9 770 aaKnown RBP12.77□□□□□ -0.37
TRAF3-201ENST00000347662 CARD6Q9BX69 1037 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 OGFRQ9NZT2 677 aa12.77□□□□□ -0.37
TRAF3-201ENST00000347662 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 A6NNZ2 444 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 E2F6O75461 281 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 CARSP49589 748 aaKnown RBP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 NLRP9Q7RTR0 991 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 ABCA8O94911 1581 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 DPH5Q9H2P9 285 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 TAB2Q9NYJ8 693 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 SLC4A7Q9Y6M7 1214 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 JAK2O60674 1132 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 BBOX1O75936 387 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 WASHC5Q12768 1159 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 NELFBQ8WX92 580 aa12.76□□□□□ -0.37
TRAF3-201ENST00000347662 FAM207AQ9NSI2 230 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-201ENST00000347662 TOM1L1O75674 476 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms