RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 INTS9Q9NV88 658 aaKnown RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 STX2P32856 288 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 PRCPP42785 496 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 FXR1P51114 621 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPL28-201ENST00000344063 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 KIAA1024Q9UPX6 916 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 PRR16Q569H4 304 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 ZNF365Q70YC5 407 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 TRIM6Q9C030 488 aaPredicted RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 SYNCQ9H7C4 482 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPL28-201ENST00000344063 SMARCAL1Q9NZC9 954 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 PCDHA13Q9Y5I0 950 aa11.9□□□□□ -0.5
RPL28-201ENST00000344063 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
RPL28-201ENST00000344063 SMIM24O75264 130 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 GUCY1A2P33402 732 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 LRRC41Q15345 812 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 MUM1Q2TAK8 710 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 WDR44Q5JSH3 913 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 CCDC17Q96LX7 622 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 PLAAQ9Y263 795 aa11.9□□□□□ -0.51
RPL28-201ENST00000344063 DHX9Q08211 1270 aaKnown RBP11.89□□□□□ -0.51
RPL28-201ENST00000344063 BEND6Q5SZJ8 279 aaPredicted RBP11.89□□□□□ -0.51
RPL28-201ENST00000344063 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 KRT26Q7Z3Y9 468 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 PIGSQ96S52 555 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 TCHPQ9BT92 498 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 A0A1W2PQC6 194 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 CFBP00751 764 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 NR2F2P24468 414 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 MYO1EQ12965 1108 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 ARHGAP44Q17R89 818 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 KRT5P13647 590 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 HNRNPH1P31943 449 aaKnown RBP11.89□□□□□ -0.51
RPL28-201ENST00000344063 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 TPH2Q8IWU9 490 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 MAIP1Q8WWC4 291 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 MCUR1Q96AQ8 359 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 FNBP1Q96RU3 617 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
RPL28-201ENST00000344063 GAS7O60861 476 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 IRAK1P51617 712 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 IWS1Q96ST2 819 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 FAM167BQ9BTA0 163 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 LRRC1Q9BTT6 524 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 PSD3Q9NYI0 1048 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 SERPING1P05155 500 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 LIMA1Q9UHB6 759 aaKnown RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 ORC4O43929 436 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
RPL28-201ENST00000344063 FERP16591 822 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 C10orf76Q5T2E6 689 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 UNC13DQ70J99 1090 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 FBXO11Q86XK2 927 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 DCP1AQ9NPI6 582 aaPredicted RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 KLHL14Q9P2G3 628 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 SEC24CP53992 1094 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 PLTPP55058 493 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 TCP10Q12799 353 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 NR1I3Q14994 352 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 RBBP5Q15291 538 aaKnown RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 ELAC2Q9BQ52 826 aaKnown RBP11.88□□□□□ -0.51
RPL28-201ENST00000344063 CD248Q9HCU0 757 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 HPCAL4Q9UM19 191 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
RPL28-201ENST00000344063 TRIM37O94972 964 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 TTLL1O95922 423 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 ORC2Q13416 577 aaPredicted RBP11.87□□□□□ -0.51
RPL28-201ENST00000344063 BIRC3Q13489 604 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 BIRC2Q13490 618 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
RPL28-201ENST00000344063 FERMT1Q9BQL6 677 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms