RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 EXOC1LA0A1B0GW35 172 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 KRT16P08779 473 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 BRD2P25440 801 aaKnown RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 ARL4AP40617 200 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 AK2P54819 239 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 ANKS3Q6ZW76 656 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 CATSPER3Q86XQ3 398 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 ARMCX3Q9UH62 379 aaPredicted RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 BLOC1S6Q9UL45 172 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 BASP1P80723 227 aaKnown RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 ZNF556Q9HAH1 456 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 NSMCE4AQ9NXX6 385 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 TMED2Q15363 201 aa18.98■□□□□ 0.63
SMAD4-201ENST00000342988 RNF219Q5W0B1 726 aaPredicted RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 APOBEC2Q9Y235 224 aaKnown RBP18.98■□□□□ 0.63
SMAD4-201ENST00000342988 STX3Q13277 289 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 TTLL11Q8NHH1 800 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 EPHB1P54762 984 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 SNAP25P60880 206 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 AP1B1Q10567 949 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 RGL1Q9NZL6 768 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 MAGEB5Q9BZ81 275 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 KDRP35968 1356 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 TMED10P49755 219 aaKnown RBP18.97■□□□□ 0.63
SMAD4-201ENST00000342988 TPH2Q8IWU9 490 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 STOML1Q9UBI4 398 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 SBNO2Q9Y2G9 1366 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 STK17AQ9UEE5 414 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 CYP2J2P51589 502 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 EFTUD2Q15029 972 aaKnown RBP eCLIP18.97■□□□□ 0.636e-8■■■■■ 28.2
SMAD4-201ENST00000342988 MRPL47Q9HD33 250 aaKnown RBP18.97■□□□□ 0.63
SMAD4-201ENST00000342988 PKD2L2Q9NZM6 624 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 KRT14P02533 472 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 ANXA13P27216 316 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 GUCY2DQ02846 1103 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 GDAP1Q8TB36 358 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 SNX25Q9H3E2 840 aa18.97■□□□□ 0.63
SMAD4-201ENST00000342988 SGO2Q562F6 1265 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 ASZ1Q8WWH4 475 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 NFE2L3Q9Y4A8 694 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 CAPZA2P47755 286 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 PDE1AP54750 535 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 ADCY2Q08462 1091 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 GANCQ8TET4 914 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 SMARCAD1Q9H4L7 1026 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 WDR75Q8IWA0 830 aaKnown RBP18.96■□□□□ 0.63
SMAD4-201ENST00000342988 LRWD1Q9UFC0 647 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 ZNF711Q9Y462 761 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 E2F5Q15329 346 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 TRIM69Q86WT6 500 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 ADAMTS2O95450 1211 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 CNGA3Q16281 694 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 MYOCDQ8IZQ8 938 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 RNF103-CHMP3A0A140T963 221 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 TBC1D4O60343 1298 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 POLGP54098 1239 aaPredicted RBP18.96■□□□□ 0.63
SMAD4-201ENST00000342988 EML4Q9HC35 981 aaKnown RBP18.96■□□□□ 0.63
SMAD4-201ENST00000342988 HPCAL4Q9UM19 191 aa18.96■□□□□ 0.63
SMAD4-201ENST00000342988 SERPINB1P30740 379 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 PMS2P54278 862 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 NR1H3Q13133 447 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 CALR3Q96L12 384 aaKnown RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 SRPK1Q96SB4 655 aaKnown RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 TRIP4Q15650 581 aaPredicted RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 CENPPQ6IPU0 288 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 TMC2Q8TDI7 906 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 FMO2Q99518 471 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 LCMT1Q9UIC8 334 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 PCDHB4Q9Y5E5 795 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 ADCY3O60266 1144 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 MAGOHBQ96A72 148 aaKnown RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 CYTH2Q99418 400 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 NIP7Q9Y221 180 aaKnown RBP eCLIP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 ATP8B1O43520 1251 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 NUGGCQ68CJ6 796 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 A0A087WUV0 522 aaPredicted RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 MORC3Q14149 939 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 CDR2LQ86X02 465 aaPredicted RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 FAM178BQ8IXR5 827 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 RABGGTAQ92696 567 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 SLC4A7Q9Y6M7 1214 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 MYH7P12883 1935 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 DTNBO60941 627 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 IL10P22301 178 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 MAP4P27816 1152 aaKnown RBP18.95■□□□□ 0.62
SMAD4-201ENST00000342988 USH1GQ495M9 461 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 CHST3Q7LGC8 479 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 SIKE1Q9BRV8 207 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
SMAD4-201ENST00000342988 K7ENM7 598 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 HSPA4LO95757 839 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 CASP14P31944 242 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 IFNAR2P48551 515 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 TFDP1Q14186 410 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 CCNYQ8ND76 341 aa18.94■□□□□ 0.62
SMAD4-201ENST00000342988 TBC1D19Q8N5T2 526 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms