RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 RBL2Q08999 1139 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 IKBKEQ14164 716 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 GNPTABQ3T906 1256 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 CELF3Q5SZQ8 465 aaKnown RBP15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 FCHSD1Q86WN1 690 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 PIGSQ96S52 555 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
NECTIN1-203ENST00000341398 HAS3O00219 553 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 OPLAHO14841 1288 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 STAM2O75886 525 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 GGPS1O95749 300 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CYP21A2P08686 494 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CHMLP26374 656 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 ARNTL2Q8WYA1 636 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CERS4Q9HA82 394 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CHD7Q9P2D1 2997 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 PRRC2BQ5JSZ5 2229 aaKnown RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 E7EWF7 191 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 NOP56O00567 594 aaKnown RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 PPP1R11O60927 126 aaPredicted RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CXCL10P02778 98 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 ZNF286BP0CG31 522 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 GSPT1P15170 499 aaKnown RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 WDR5P61964 334 aaKnown RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 TAP1Q03518 808 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 ADAMTS19Q8TE59 1207 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 CUL5Q93034 780 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 IL25Q9H293 177 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 COG5Q9UP83 839 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 SUPT16HQ9Y5B9 1047 aaKnown RBP15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 MTCH2Q9Y6C9 303 aa15.11■□□□□ 0.01
NECTIN1-203ENST00000341398 TCF20Q9UGU0 1960 aaKnown RBP15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 EMSYQ7Z589 1322 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 RFXAPO00287 272 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 RGS20O76081 388 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 HOXD8P13378 290 aaPredicted RBP15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 PDE4AP27815 886 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 KIF5BP33176 963 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 PTH1RQ03431 593 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 NEDD9Q14511 834 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 HSDL1Q3SXM5 330 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 TMTC2Q8N394 836 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 CTCFLQ8NI51 663 aaPredicted RBP15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 RAD9AQ99638 391 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 USP26Q9BXU7 913 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 RAPGEFL1Q9UHV5 662 aa15.1■□□□□ 0.01
NECTIN1-203ENST00000341398 NCOR1O75376 2440 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 H3BRB1 525 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 GNAT1P11488 350 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 TROAPQ12815 778 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 ZNF618Q5T7W0 954 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 MAP3K14Q99558 947 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 TUT1Q9H6E5 874 aaKnown RBP15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 LMCD1Q9NZU5 365 aa15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
NECTIN1-203ENST00000341398 SGSM2O43147 1006 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 CYTH3O43739 400 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 SORBS3O60504 671 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 NBNO60934 754 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 LGR5O75473 907 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 UBA1P22314 1058 aaKnown RBP15.08■□□□□ 0
NECTIN1-203ENST00000341398 SMARCA1P28370 1054 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 THPOP40225 353 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 GNAQP50148 359 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 SP2Q02086 613 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 GPNMBQ14956 572 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 SMARCC2Q8TAQ2 1214 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 MAP4K1Q92918 833 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 MTA3Q9BTC8 594 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 TRANK1O15050 2925 aa15.08■□□□□ 0
NECTIN1-203ENST00000341398 PTPRSQ13332 1948 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 RSPH10B2B2RC85 870 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 FIBPO43427 364 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 GJB5O95377 273 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 RSPH10BP0C881 870 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 ICAM3P32942 547 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 ZNF200P98182 395 aaPredicted RBP15.07■□□□□ 0
NECTIN1-203ENST00000341398 XRRA1Q6P2D8 792 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 SERINC5Q86VE9 423 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 GIMAP8Q8ND71 665 aaPredicted RBP15.07■□□□□ 0
NECTIN1-203ENST00000341398 IL31RAQ8NI17 732 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 IGDCC4Q8TDY8 1250 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 PIBF1Q8WXW3 757 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 TGS1Q96RS0 853 aaKnown RBP15.07■□□□□ 0
NECTIN1-203ENST00000341398 C16orf70Q9BSU1 422 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 INSL6Q9Y581 213 aa15.07■□□□□ 0
NECTIN1-203ENST00000341398 SPATA31C2B4DYI2 1134 aa15.06■□□□□ 0
NECTIN1-203ENST00000341398 DDAH1O94760 285 aa15.06■□□□□ 0
NECTIN1-203ENST00000341398 AMHP03971 560 aa15.06■□□□□ 0
NECTIN1-203ENST00000341398 BMP1P13497 986 aa15.06■□□□□ 0
NECTIN1-203ENST00000341398 DEFB103AP81534 67 aa15.06■□□□□ 0
NECTIN1-203ENST00000341398 GRB10Q13322 594 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms