RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 OPHN1O60890 802 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
TNC-201ENST00000341037 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
TNC-201ENST00000341037 PDE1BQ01064 536 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 KCTD16Q68DU8 428 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 LRGUKQ96M69 825 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 ADD3Q9UEY8 706 aaKnown RBP12.37□□□□□ -0.43
TNC-201ENST00000341037 MAN1B1Q9UKM7 699 aa12.37□□□□□ -0.43
TNC-201ENST00000341037 MYO1FO00160 1098 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 MOCS3O95396 460 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 SUPT20HL1Q3ZLR7 823 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 CACTINQ8WUQ7 758 aaKnown RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 P2RX5Q93086 422 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 RIPOR2Q9Y4F9 1068 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 PPP6R2O75170 966 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 CPP00450 1065 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 SMAP1Q8IYB5 467 aaPredicted RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 BBOF1Q8ND07 529 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNC-201ENST00000341037 GOLGA8IPA6NC78 632 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 GOLGA8JA6NMD2 632 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 RCN2Q14257 317 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 TMED2Q15363 201 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 APOA5Q6Q788 366 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 PDZD8Q8NEN9 1154 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 MECOMQ03112 1051 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 TRIP13Q15645 432 aaPredicted RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 DARS2Q6PI48 645 aaKnown RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 KRT27Q7Z3Y8 459 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 SLC35F6Q8N357 371 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 ATP6V1E2Q96A05 226 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 MAGOHBQ96A72 148 aaKnown RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 ZMYND10O75800 440 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 TCP1P17987 556 aaKnown RBP12.36□□□□□ -0.43
TNC-201ENST00000341037 CDC25AP30304 524 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 DBN1Q16643 649 aa12.36□□□□□ -0.43
TNC-201ENST00000341037 BPIFB4P59827 614 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 COG7P83436 770 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CDC37Q16543 378 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 SPDL1Q96EA4 605 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 OR6B2Q6IFH4 312 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CFAP61Q8NHU2 1237 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 HEXIM2Q96MH2 286 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CXCR5P32302 372 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 NR5A1Q13285 461 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 BBS5Q8N3I7 341 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 BAG5Q9UL15 447 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 PSAPP07602 524 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 PPP2R5EQ16537 467 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 DNAAF3Q8N9W5 541 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 PLEKHF1Q96S99 279 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 HAUS4Q9H6D7 363 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 ADGRL2O95490 1459 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 HEXIM1O94992 359 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 ANXA13P27216 316 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 RASEFQ8IZ41 740 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 CPSF2Q9P2I0 782 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 BNIP3LO60238 219 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 CYP21A2P08686 494 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 EEF1GP26641 437 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 IQCB1Q15051 598 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 TTC30AQ86WT1 665 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 HSPH1Q92598 858 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 KANSL2Q9H9L4 492 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 COPRSQ9NQ92 184 aa12.35□□□□□ -0.43
TNC-201ENST00000341037 ZNF215Q9UL58 517 aaPredicted RBP12.35□□□□□ -0.43
TNC-201ENST00000341037 MCF2LO15068 1137 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 FTCDO95954 541 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 MMP1P03956 469 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 ASPHQ12797 758 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 ARHGEF18Q6ZSZ5 1173 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 OLA1Q9NTK5 396 aaKnown RBP12.34□□□□□ -0.43
TNC-201ENST00000341037 SLC12A6Q9UHW9 1150 aa12.34□□□□□ -0.43
TNC-201ENST00000341037 ARAP3Q8WWN8 1544 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms