RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 BARHL2Q9NY43 387 aa16.78■□□□□ 0.28
ERCC1-203ENST00000340192 SPDYE3A6NKU9 549 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 ICAM3P32942 547 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 EPHB4P54760 987 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 CHMP4BP1P59074 171 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 SHHQ15465 462 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
ERCC1-203ENST00000340192 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 LRCH3Q96II8 777 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 RIC8AQ9NPQ8 531 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
ERCC1-203ENST00000340192 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.28
ERCC1-203ENST00000340192 FIBPO43427 364 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 SCG2P13521 617 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 ADCY7P51828 1080 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
ERCC1-203ENST00000340192 SEMA3FQ13275 785 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 HSDL1Q3SXM5 330 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 KAT2BQ92831 832 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 PHKBQ93100 1093 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 HIPK3Q9H422 1215 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 MLXIPQ9HAP2 919 aa16.76■□□□□ 0.27
ERCC1-203ENST00000340192 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
ERCC1-203ENST00000340192 SMCO2A6NFE2 343 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 PRPF3O43395 683 aaKnown RBP16.75■□□□□ 0.27
ERCC1-203ENST00000340192 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 ZNF286BP0CG31 522 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 HOXD8P13378 290 aaPredicted RBP16.75■□□□□ 0.27
ERCC1-203ENST00000340192 CYP2C18P33260 490 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 NTRK3Q16288 839 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 TMEM199Q8N511 208 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
ERCC1-203ENST00000340192 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
ERCC1-203ENST00000340192 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
ERCC1-203ENST00000340192 UMODL1Q5DID0 1318 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 PPFIA4O75335 1185 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 CYP2C9P11712 490 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 CSF2RAP15509 400 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 IFNAR1P17181 557 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 PTPN11Q06124 597 aaPredicted RBP16.74■□□□□ 0.27
ERCC1-203ENST00000340192 NEDD9Q14511 834 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 PKN1Q16512 942 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 CYFIP1Q7L576 1253 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 ZNF274Q96GC6 653 aaPredicted RBP16.74■□□□□ 0.27
ERCC1-203ENST00000340192 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
ERCC1-203ENST00000340192 F2P00734 622 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 ITGB5P18084 799 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
ERCC1-203ENST00000340192 PSEN2P49810 448 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 ANAPC15P60006 121 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
ERCC1-203ENST00000340192 PPIGQ13427 754 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■■□□ 18.4
ERCC1-203ENST00000340192 MFSD10Q14728 455 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 METTL7BQ6UX53 244 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 GPRASP2Q96D09 838 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 PGBD1Q96JS3 809 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 KATNAL1Q9BW62 490 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 SLC26A6Q9BXS9 759 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
ERCC1-203ENST00000340192 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 TMEM260Q9NX78 707 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 UBIAD1Q9Y5Z9 338 aa16.73■□□□□ 0.27
ERCC1-203ENST00000340192 TANC1Q9C0D5 1861 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
ERCC1-203ENST00000340192 SEC24BO95487 1268 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 FOSP01100 380 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-203ENST00000340192 CCL23P55773 120 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 STK3Q13188 491 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 MTMR1Q13613 665 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 KIAA0753Q2KHM9 967 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 C16orf59Q7L2K0 433 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 SESTD1Q86VW0 696 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 C7orf31Q8N865 590 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 CCDC12Q8WUD4 166 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-203ENST00000340192 CDHR1Q96JP9 859 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 SENP7Q9BQF6 1050 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 ALG1Q9BT22 464 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 WNT8AQ9H1J5 351 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
ERCC1-203ENST00000340192 ESYT2A0FGR8 921 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 HAS3O00219 553 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 EIF5BO60841 1220 aaKnown RBP16.71■□□□□ 0.27
ERCC1-203ENST00000340192 ACRP10323 421 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 AP3B2Q13367 1082 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 PTGISQ16647 500 aa16.71■□□□□ 0.27
ERCC1-203ENST00000340192 GDF6Q6KF10 455 aaPredicted RBP16.71■□□□□ 0.27
ERCC1-203ENST00000340192 GIMAP8Q8ND71 665 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms