RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 SEC23AQ15436 765 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MEI1Q5TIA1 1274 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 FAM43BQ6ZT52 329 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 PIGWQ7Z7B1 504 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 DDX42Q86XP3 938 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 GPIHBP1Q8IV16 184 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 TTC5Q8N0Z6 440 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 USP38Q8NB14 1042 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 CCDC197Q8NCU1 140 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 P2RX5Q93086 422 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MAGOHBQ96A72 148 aaKnown RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 CENPTQ96BT3 561 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 LRRC45Q96CN5 670 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 CHMP6Q96FZ7 201 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 LRRC4CQ9HCJ2 640 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 TIAM2Q8IVF5 1701 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 LRRC53A6NM62 1247 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 ENO4A6NNW6 628 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 ADAMTS3O15072 1205 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 FTCDO95954 541 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 PCCAP05165 728 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 LONP1P36776 959 aaKnown RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 RWDD2BP57060 319 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 HLTFQ14527 1009 aaKnown RBP eCLIP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 PPP2R5BQ15173 497 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 TBC1D1Q86TI0 1168 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 PNMA8AQ86V59 439 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 KLHL7Q8IXQ5 586 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MDM1Q8TC05 714 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 BAP1Q92560 729 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 ZBTB10Q96DT7 871 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 XPO6Q96QU8 1125 aaKnown RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 DISC1Q9NRI5 854 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 FAM207AQ9NSI2 230 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 SLC5A4Q9NY91 659 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 FBXL5Q9UKA1 691 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 SLC4A4Q9Y6R1 1079 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MYH7BA7E2Y1 1941 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 A6NHS1 94 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 RBAK-RBAKDNI3L0D1 243 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 PRKAB2O43741 272 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 DNA2P51530 1060 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 CUL1Q13616 776 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 HGSNATQ68CP4 663 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 RRAGAQ7L523 313 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 FAM114A1Q8IWE2 563 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 LRRC15Q8TF66 581 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 DCAF5Q96JK2 942 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 KBTBD4Q9NVX7 518 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 NOP53Q9NZM5 478 aaKnown RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 SWAP70Q9UH65 585 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 CFAP73A6NFT4 308 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 ASAP2O43150 1006 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 AP1G2O75843 785 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 SNUPNO95149 360 aaKnown RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 MBD4O95243 580 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 PLEKHA8P1O95397 391 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 PECAM1P16284 738 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 TRAPPC10P48553 1259 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 TNNC1P63316 161 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 MKRN4PQ13434 485 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 NAB2Q15742 525 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 ARL6IP4Q66PJ3 421 aaKnown RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 PIK3AP1Q6ZUJ8 805 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 SCFD2Q8WU76 684 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 TLCD1Q96CP7 247 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 ARMT1Q9H993 441 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 PACSIN2Q9UNF0 486 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-201ENST00000339754 AGAP1Q9UPQ3 857 aa10.33□□□□□ -0.76
NECAP1-201ENST00000339754 NUP188Q5SRE5 1749 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 LIN7AO14910 233 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 DIAPH2O60879 1101 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 LINGO3P0C6S8 592 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 CABP4P57796 275 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 EHHADHQ08426 723 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 BLMHQ13867 455 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 ITIH4Q14624 930 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 VWA3BQ502W6 1294 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 THEMIS2Q5TEJ8 643 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 RIC1Q4ADV7 1423 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 SSU72P8A0A1W2PR75 194 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 BICDL2A1A5D9 508 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 MYL1P05976 194 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 ITGA6P23229 1130 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 STK4Q13043 487 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 PROCA1Q8NCQ7 364 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 UBLCP1Q8WVY7 318 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 CALR3Q96L12 384 aaKnown RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 PSMD1Q99460 953 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
NECAP1-201ENST00000339754 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-201ENST00000339754 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms