RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 RGS19P49795 217 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 PSMD2Q13200 908 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 TATDN1Q6P1N9 297 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 LMBR1LQ6UX01 489 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ZNF513Q8N8E2 541 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 CUL5Q93034 780 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ABHD10Q9NUJ1 306 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ADAMTS5Q9UNA0 930 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 SLC12A4Q9UP95 1085 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 U3KPZ7 1027 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 EYA2O00167 538 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 DDNO94850 711 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 EZRP15311 586 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ATP2B4P23634 1241 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 PEX19P40855 299 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ITIH3Q06033 890 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 RBBP5Q15291 538 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ALS2CLQ60I27 953 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 CAPRIN2Q6IMN6 1127 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 RUBCNQ92622 972 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 EZH1Q92800 747 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 NEUROD6Q96NK8 337 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 SERPINA10Q9UK55 444 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 MCM3APO60318 1980 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 WNT10BO00744 389 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 PPP6R2O75170 966 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TOMM70O94826 608 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 KIAA0754O94854 1291 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CD44P16070 742 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 ATP1A2P50993 1020 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 NNTQ13423 1086 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CUL4BQ13620 913 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 ANO1Q5XXA6 986 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 PODNQ7Z5L7 613 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TAX1BP1Q86VP1 789 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TRMT44Q8IYL2 757 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 NSUN4Q96CB9 384 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CRACR2AQ9BSW2 395 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 DDX4Q9NQI0 724 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TRMT112Q9UI30 125 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 WWC3Q9ULE0 1092 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 HPS5Q9UPZ3 1129 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 NLRC5Q86WI3 1866 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 SPDYE2BA6NHP3 402 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 F8W031 263 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TRAPPC3O43617 180 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 ANP32DO95626 131 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 SPDYE6P0CI01 402 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 MAGEA8P43361 318 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 KIF23Q02241 960 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 GPAT2Q6NUI2 795 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 ZFAND2BQ8WV99 257 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 IFT43Q96FT9 208 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 RPGRIP1Q96KN7 1286 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 LRRC1Q9BTT6 524 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CREBZFQ9NS37 354 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CPSF2Q9P2I0 782 aaKnown RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 MYH10P35580 1976 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 H0YGN5 161 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 PPFIA2O75334 1257 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 RNF8O76064 485 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 POLR3DP05423 398 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 PAEPP09466 180 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 SYKP43405 635 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TM4SF4P48230 202 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 GCLCP48506 637 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 MNX1P50219 401 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 TUBP50607 506 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 C2orf54Q08AI8 447 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 IFFO1Q0D2I5 559 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 G3BP1Q13283 466 aaKnown RBP eCLIP6.2□□□□□ -1.421e-6■■□□□ 12.6
CSDE1-202ENST00000339438 KRT32Q14532 448 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 WDR59Q6PJI9 974 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 HHIPL2Q6UWX4 724 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 MFN1Q8IWA4 741 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 ZNF274Q96GC6 653 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-202ENST00000339438 CHP1Q99653 195 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 HINFPQ9BQA5 517 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 L3MBTL1Q9Y468 752 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 NFS1Q9Y697 457 aa6.2□□□□□ -1.42
CSDE1-202ENST00000339438 LRRC10BA6NIK2 292 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 HIP1O00291 1037 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 FAM153BP0C7A2 387 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 GHRP10912 638 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 IMPDH2P12268 514 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 CDC25AP30304 524 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 ZNF268Q14587 947 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-202ENST00000339438 FAM153CQ494X1 144 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 HAUS3Q68CZ6 603 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 KCTD16Q68DU8 428 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 SND1Q7KZF4 910 aaKnown RBP eCLIP6.19□□□□□ -1.42
CSDE1-202ENST00000339438 LDHDQ86WU2 507 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 MREGQ8N565 214 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 EDC3Q96F86 508 aaKnown RBP6.19□□□□□ -1.42
CSDE1-202ENST00000339438 SCLT1Q96NL6 688 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 SPAG5Q96R06 1193 aa6.19□□□□□ -1.42
CSDE1-202ENST00000339438 PTPN18Q99952 460 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms