RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GSDMDP57764 484 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 RBL2Q08999 1139 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 ORC2Q13416 577 aaPredicted RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 KCNJ12Q14500 433 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 MTF1Q14872 753 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 SPECC1LQ69YQ0 1117 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 PIGOQ8TEQ8 1089 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 HOOK2Q96ED9 719 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 RAB34Q9BZG1 259 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 CUEDC2Q9H467 287 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 RPAP3Q9H6T3 665 aaPredicted RBP8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 FEM1BQ9UK73 627 aa8.28□□□□□ -1.08
SRFBP1-201ENST00000339397 DNAH12Q6ZR08 3092 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 A0A0U1RQJ8 604 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 LRRC10BA6NIK2 292 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 PBX1P40424 430 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 HMGCS2P54868 508 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 TRMT1LQ7Z2T5 733 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 ATRIPQ8WXE1 791 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CLEC4DQ8WXI8 215 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 GLT8D2Q9H1C3 349 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 TMX1Q9H3N1 280 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 VAV3Q9UKW4 847 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CEP350Q5VT06 3117 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 ABCB11O95342 1321 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 PES1O00541 588 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 PLA2G4BP0C869 781 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 YBX3P16989 372 aaKnown RBP eCLIP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 PTPRAP18433 802 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CIITAP33076 1130 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 KLK7P49862 253 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 FXR1P51114 621 aaKnown RBP eCLIP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 COPB1P53618 953 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CTTNQ14247 550 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 Q4G0T1 1027 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CCAR2Q8N163 923 aaKnown RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 CSGALNACT2Q8N6G5 542 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 ATG4CQ96DT6 458 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 SLF1Q9BQI6 1058 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 WRAP73Q9P2S5 460 aaPredicted RBP8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 SYNPO2Q9UMS6 1093 aa8.27□□□□□ -1.09
SRFBP1-201ENST00000339397 RSPH10B2B2RC85 870 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 DDX39AO00148 427 aaKnown RBP8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 GYPCP04921 128 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 ICAM1P05362 532 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 RSPH10BP0C881 870 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 TNNT1P13805 278 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 ITGB5P18084 799 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 CYP11B2P19099 503 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 CASP14P31944 242 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 AMPD3Q01432 767 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 P2RX5Q93086 422 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 WDR11Q9BZH6 1224 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 IKZF4Q9H2S9 585 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 ZHX3Q9H4I2 956 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 STK17AQ9UEE5 414 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 PSMA7O14818 248 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 MYL1P05976 194 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 LMNB1P20700 586 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 CASP5P51878 434 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SLC12A3P55017 1021 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 EHHADHQ08426 723 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 COASYQ13057 564 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 UNC13DQ70J99 1090 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 OTOP1Q7RTM1 612 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 FAM160B2Q86V87 743 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SLFN12Q8IYM2 578 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SH2D3AQ9BRG2 576 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SH2D4AQ9H788 454 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SLC38A10Q9HBR0 1119 aa8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 LIMA1Q9UHB6 759 aaKnown RBP8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 MRPL11Q9Y3B7 192 aaKnown RBP8.26□□□□□ -1.09
SRFBP1-201ENST00000339397 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 B4DLN1 442 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 PLA2G6O60733 806 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 CYP3A4P08684 503 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 CCNE1P24864 410 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 BACE1P56817 501 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 UBXN1Q04323 297 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 HYIQ5T013 277 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 TOGARAM2Q6ZUX3 1019 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 MOB2Q70IA6 237 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 GPBP1Q86WP2 473 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 TPH2Q8IWU9 490 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 NELFCDQ8IXH7 590 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 CCDC150Q8NCX0 1101 aa8.25□□□□□ -1.09
SRFBP1-201ENST00000339397 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms