RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 LAMC2Q13753 1193 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 GPNMBQ14956 572 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 KRT40Q6A162 431 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 PPTC7Q8NI37 304 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 AMNQ9BXJ7 453 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 CNNM2Q9H8M5 875 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 CTNNA3Q9UI47 895 aa18.2■□□□□ 0.5
LINC01116-202ENST00000339037 F2P00734 622 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 ZNF286BP0CG31 522 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 CKBP12277 381 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 PSEN2P49810 448 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 IFIT1BQ5T764 474 aaKnown RBP18.19■□□□□ 0.5
LINC01116-202ENST00000339037 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 ZBED2Q9BTP6 218 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 HDAC6Q9UBN7 1215 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 COG5Q9UP83 839 aa18.19■□□□□ 0.5
LINC01116-202ENST00000339037 LCHNA4D1U4 455 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 OPLAHO14841 1288 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 CXCL10P02778 98 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 HSD17B4P51659 736 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 GRB10Q13322 594 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 MFSD10Q14728 455 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 KIAA0753Q2KHM9 967 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 SPRED2Q7Z698 418 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 TMCO2Q7Z6W1 182 aaPredicted RBP18.18■□□□□ 0.5
LINC01116-202ENST00000339037 DHX37Q8IY37 1157 aaKnown RBP18.18■□□□□ 0.5
LINC01116-202ENST00000339037 ALG1Q9BT22 464 aa18.18■□□□□ 0.5
LINC01116-202ENST00000339037 TRIP12Q14669 1992 aaPredicted RBP18.18■□□□□ 0.5
LINC01116-202ENST00000339037 KIAA1217Q5T5P2 1943 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 BRWD1Q9NSI6 2320 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 NBNO60934 754 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 DEFB103AP81534 67 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 GHRHRQ02643 423 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 PTK7Q13308 1070 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 STAG2Q8N3U4 1231 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 PCDHA1Q9Y5I3 950 aa18.17■□□□□ 0.5
LINC01116-202ENST00000339037 HAS3O00219 553 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 ZBTB5O15062 677 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 LPXNO60711 386 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 EFCAB14O75071 495 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 GJB5O95377 273 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 MYCLP12524 364 aaPredicted RBP18.16■□□□□ 0.5
LINC01116-202ENST00000339037 HOXD8P13378 290 aaPredicted RBP18.16■□□□□ 0.5
LINC01116-202ENST00000339037 KCNV1Q6PIU1 500 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 HLA-CQ95604 372 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 SPATA33Q96N06 139 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 PDCD2LQ9BRP1 358 aa18.16■□□□□ 0.5
LINC01116-202ENST00000339037 MAP3K20Q9NYL2 800 aaKnown RBP18.16■□□□□ 0.5
LINC01116-202ENST00000339037 TCF20Q9UGU0 1960 aaKnown RBP18.16■□□□□ 0.5
LINC01116-202ENST00000339037 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
LINC01116-202ENST00000339037 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 RGS20O76081 388 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
LINC01116-202ENST00000339037 IKBKEQ14164 716 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 MYSM1Q5VVJ2 828 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 STOX1Q6ZVD7 989 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 MTMR8Q96EF0 704 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 RAD9AQ99638 391 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 RAPGEFL1Q9UHV5 662 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 MAD2L2Q9UI95 211 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 MTUS1Q9ULD2 1270 aa18.15■□□□□ 0.5
LINC01116-202ENST00000339037 SORBS3O60504 671 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 GGPS1O95749 300 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 PGM5Q15124 567 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 SEC23AQ15436 765 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 TCTN1Q2MV58 587 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 TRIM71Q2Q1W2 868 aaKnown RBP18.14■□□□□ 0.49
LINC01116-202ENST00000339037 HSDL1Q3SXM5 330 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 CELF3Q5SZQ8 465 aaKnown RBP18.14■□□□□ 0.49
LINC01116-202ENST00000339037 ZNF618Q5T7W0 954 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 TRAF7Q6Q0C0 670 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 VSIG10LQ86VR7 867 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 WNT8BQ93098 351 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
LINC01116-202ENST00000339037 STK24Q9Y6E0 443 aa18.14■□□□□ 0.49
LINC01116-202ENST00000339037 PTPRSQ13332 1948 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 UBA1P22314 1058 aaKnown RBP18.13■□□□□ 0.49
LINC01116-202ENST00000339037 ZNF200P98182 395 aaPredicted RBP18.13■□□□□ 0.49
LINC01116-202ENST00000339037 TRDNQ13061 729 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 TRAF1Q13077 416 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 MBTPS1Q14703 1052 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 IL31RAQ8NI17 732 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
LINC01116-202ENST00000339037 IL25Q9H293 177 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 LMCD1Q9NZU5 365 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 EMSYQ7Z589 1322 aa18.13■□□□□ 0.49
LINC01116-202ENST00000339037 COL4A4P53420 1690 aaPredicted RBP18.12■□□□□ 0.49
LINC01116-202ENST00000339037 LINC01553A4QN01 128 aa18.12■□□□□ 0.49
LINC01116-202ENST00000339037 PALM3A6NDB9 673 aaPredicted RBP18.12■□□□□ 0.49
LINC01116-202ENST00000339037 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
LINC01116-202ENST00000339037 LGR5O75473 907 aa18.12■□□□□ 0.49
LINC01116-202ENST00000339037 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
LINC01116-202ENST00000339037 TGFB3P10600 412 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms