RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 FAM212AQ96EL1 285 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 TACO1Q9BSH4 297 aaKnown RBP15.55■□□□□ 0.08
PCDH8-201ENST00000338862 AMACRQ9UHK6 382 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 SALL4Q9UJQ4 1053 aa15.55■□□□□ 0.08
PCDH8-201ENST00000338862 SSR1P43307 286 aaKnown RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 VPS36Q86VN1 386 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 MLXIPLQ9NP71 852 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 CHORDC1Q9UHD1 332 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 PCDHA12Q9UN75 941 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 ANO9A1A5B4 782 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 NAA25Q14CX7 972 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 TTMPQ5BVD1 217 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 HAUS3Q68CZ6 603 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 ELOA2Q8IYF1 753 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 MYCBPQ99417 103 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 NUDT12Q9BQG2 462 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 VIPAS39Q9H9C1 493 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 CD2APQ9Y5K6 639 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 LRRC37A3O60309 1634 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 CLTAP09496 248 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 LSP1P33241 339 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 FUT2Q10981 343 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF211Q13398 564 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 MSL1Q68DK7 614 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 RETREG2Q8NC44 543 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF512BQ96KM6 892 aaPredicted RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 BRIP1Q9BX63 1249 aa15.54■□□□□ 0.08
PCDH8-201ENST00000338862 CELF4Q9BZC1 486 aaKnown RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 DNAJC17Q9NVM6 304 aaKnown RBP15.54■□□□□ 0.08
PCDH8-201ENST00000338862 MYH8P13535 1937 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 RAD51CO43502 376 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 STAT3P40763 770 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 ADCY7P51828 1080 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
PCDH8-201ENST00000338862 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
PCDH8-201ENST00000338862 EMBQ6PCB8 327 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 KIAA0895Q8NCT3 520 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 TCP11Q8WWU5 503 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 ATP8A2Q9NTI2 1148 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 TARSL2A2RTX5 802 aaKnown RBP15.53■□□□□ 0.08
PCDH8-201ENST00000338862 CETN3O15182 167 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 UBE4AQ14139 1066 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 PPP1R7Q15435 360 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF34Q8IZ26 560 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 DAPK3O43293 454 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 PRPF6O94906 941 aaKnown RBP15.53■□□□□ 0.08
PCDH8-201ENST00000338862 NR2F2P24468 414 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 NPY5RQ15761 445 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 NBPF9Q3BBW0 867 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 MDM1Q8TC05 714 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 CCT8L2Q96SF2 557 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
PCDH8-201ENST00000338862 A0A087X0T9 212 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 PHF20L1A8MW92 1017 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 GNPATO15228 680 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 FAM228BP0C875 321 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 VPS41P49754 854 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 KAT2BQ92831 832 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 COL4A3BPQ9Y5P4 624 aa15.52■□□□□ 0.08
PCDH8-201ENST00000338862 AFDNP55196 1824 aaKnown RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 CYTH3O43739 400 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 TCP10Q12799 353 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 ZNF507Q8TCN5 953 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 KCNK9Q9NPC2 374 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 ABCC6O95255 1503 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 FAM196BA6NMK8 535 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 LRRN2O75325 713 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 GFPT2O94808 682 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 SLURP2P0DP57 97 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 GJC1P36383 396 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 PLTPP55058 493 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 FAM133BQ5BKY9 247 aaKnown RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.07
PCDH8-201ENST00000338862 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 PTPN22Q9Y2R2 807 aa15.52■□□□□ 0.07
PCDH8-201ENST00000338862 ZNF804BA4D1E1 1349 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 KLRC4O43908 158 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 GCNT3O95395 438 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 BTDP43251 543 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 USP17L6PQ6QN14 398 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 SLC30A10Q6XR72 485 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 NLRP14Q86W24 1093 aa15.51■□□□□ 0.07
PCDH8-201ENST00000338862 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms