RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 PSMC6P62333 389 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 SPA17Q15506 151 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 CACNA2D4Q7Z3S7 1137 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 IFIH1Q9BYX4 1025 aaKnown RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 RAB34Q9BZG1 259 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 MAGEF1Q9HAY2 307 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 ZNF831Q5JPB2 1677 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 MMP10P09238 476 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
UBA1-201ENST00000335972 KIF5AQ12840 1032 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 BRD3Q15059 726 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
UBA1-201ENST00000335972 SIK3Q9Y2K2 1263 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 HSPA1LP34931 641 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 FAM193AP78312 1265 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 CDC37Q16543 378 aaPredicted RBP16.47■□□□□ 0.23
UBA1-201ENST00000335972 LRRC55Q6ZSA7 311 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 CYP2W1Q8TAV3 490 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 COG1Q8WTW3 980 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 DNAJC19Q96DA6 116 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 NOVP48745 357 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 KIF11P52732 1056 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 JAG1P78504 1218 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 CERS3Q8IU89 383 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 IKZF4Q9H2S9 585 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 STK17AQ9UEE5 414 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
UBA1-201ENST00000335972 LRRIQ3A6PVS8 624 aaPredicted RBP16.46■□□□□ 0.23
UBA1-201ENST00000335972 PSMD14O00487 310 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 MED24O75448 989 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 RASSF7Q02833 373 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.234e-16■■□□□ 14.3
UBA1-201ENST00000335972 FAM26FQ5R3K3 315 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 MSANTD4Q8NCY6 345 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 ERGIC2Q96RQ1 377 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
UBA1-201ENST00000335972 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 MYH10P35580 1976 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 UBXN2AP68543 259 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
UBA1-201ENST00000335972 NFRKBQ6P4R8 1299 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 SECISBP2LQ93073 1101 aaKnown RBP16.46■□□□□ 0.23
UBA1-201ENST00000335972 NUP58Q9BVL2 599 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 TRIM34Q9BYJ4 488 aa16.46■□□□□ 0.23
UBA1-201ENST00000335972 PLA2G4BP0C869 781 aa16.46■□□□□ 0.22
UBA1-201ENST00000335972 LMAN1P49257 510 aa16.46■□□□□ 0.22
UBA1-201ENST00000335972 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.22
UBA1-201ENST00000335972 MAN2A1Q16706 1144 aa16.46■□□□□ 0.22
UBA1-201ENST00000335972 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.22
UBA1-201ENST00000335972 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.46■□□□□ 0.22
UBA1-201ENST00000335972 EIF3CLB5ME19 914 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 MYBL2P10244 700 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 CASP5P51878 434 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 CASP8Q14790 479 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 GUF1Q8N442 669 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 EIF3CQ99613 913 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 ANO3Q9BYT9 981 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 TDRD3Q9H7E2 651 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 MYO1AQ9UBC5 1043 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 L1RE1Q9UN81 338 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 FAN1Q9Y2M0 1017 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 HDAC7Q8WUI4 952 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 LSM14BQ9BX40 385 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 RAB21Q9UL25 225 aa16.45■□□□□ 0.22
UBA1-201ENST00000335972 SCAF8Q9UPN6 1271 aaKnown RBP16.45■□□□□ 0.22
UBA1-201ENST00000335972 SFI1A8K8P3 1242 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 CLK2P49760 499 aaKnown RBP16.44■□□□□ 0.22
UBA1-201ENST00000335972 POLR2FP61218 127 aaKnown RBP16.44■□□□□ 0.22
UBA1-201ENST00000335972 SLC7A5Q01650 507 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 HDXQ7Z353 690 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 CHRNA5P30532 468 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 CYP2C19P33261 490 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 VAV2P52735 878 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.44■□□□□ 0.22
UBA1-201ENST00000335972 TSG101Q99816 390 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
UBA1-201ENST00000335972 MAP2K7O14733 419 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 ERLIN1O75477 346 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 MAGEA1P43355 309 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 PDIA5Q14554 519 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 SIAH1Q8IUQ4 282 aa16.44■□□□□ 0.22
UBA1-201ENST00000335972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBA1-201ENST00000335972 ACTN1P12814 892 aa16.43■□□□□ 0.22
UBA1-201ENST00000335972 ICA1Q05084 483 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms