RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SGMS1Q86VZ5 419 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 FANCBQ8NB91 859 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 KAT2BQ92831 832 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
C9orf85-201ENST00000334731 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 NEK1Q96PY6 1258 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
C9orf85-201ENST00000334731 SEC24BO95487 1268 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 SP2Q02086 613 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 DGKDQ16760 1214 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 MYSM1Q5VVJ2 828 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 PSRC1Q6PGN9 363 aaPredicted RBP12.95□□□□□ -0.34
C9orf85-201ENST00000334731 KCNV1Q6PIU1 500 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
C9orf85-201ENST00000334731 PPTC7Q8NI37 304 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 HERVK_113Q902F9 699 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 VWCEQ96DN2 955 aa12.95□□□□□ -0.34
C9orf85-201ENST00000334731 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
C9orf85-201ENST00000334731 FRMPD4Q14CM0 1322 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 PIK3CDO00329 1044 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 MEIS2O14770 477 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 PPFIA4O75335 1185 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 FGBP02675 491 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 TGFB3P10600 412 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 CELF3Q5SZQ8 465 aaKnown RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 USP17L6PQ6QN14 398 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 RPUSD2Q8IZ73 545 aaKnown RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 SCLYQ96I15 445 aa12.94□□□□□ -0.34
C9orf85-201ENST00000334731 CDX2Q99626 313 aaPredicted RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
C9orf85-201ENST00000334731 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 GGPS1O95749 300 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
C9orf85-201ENST00000334731 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
C9orf85-201ENST00000334731 HSDL1Q3SXM5 330 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 SYNE3Q6ZMZ3 975 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 OTOP2Q7RTS6 562 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 KCNB2Q92953 911 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 CUL5Q93034 780 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 TCEANC2Q96MN5 208 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 CTAGE1Q96RT6 745 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 BCAS3Q9H6U6 928 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 RTEL1Q9NZ71 1219 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 CXXC1Q9P0U4 656 aaPredicted RBP12.93□□□□□ -0.34
C9orf85-201ENST00000334731 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
C9orf85-201ENST00000334731 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 HAS3O00219 553 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 SORBS3O60504 671 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 STAM2O75886 525 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 F2P00734 622 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 DNAJB2P25686 324 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 ICAM3P32942 547 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 PSEN2P49810 448 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 KRT32Q14532 448 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 PTGISQ16647 500 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 GDF6Q6KF10 455 aaPredicted RBP12.92□□□□□ -0.34
C9orf85-201ENST00000334731 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 SLC17A8Q8NDX2 589 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 SPATA33Q96N06 139 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 INPP4AQ96PE3 977 aaPredicted RBP12.92□□□□□ -0.34
C9orf85-201ENST00000334731 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 MLXIPQ9HAP2 919 aa12.92□□□□□ -0.34
C9orf85-201ENST00000334731 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 IQCF3P0C7M6 154 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 PBX2P40425 430 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 FUT2Q10981 343 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 SEMA3FQ13275 785 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 BFSP2Q13515 415 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 MFSD10Q14728 455 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 PCNX4Q63HM2 1172 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 C7orf31Q8N865 590 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 ALG1Q9BT22 464 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 MTIF3Q9H2K0 278 aaKnown RBP12.91□□□□□ -0.34
C9orf85-201ENST00000334731 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
C9orf85-201ENST00000334731 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
C9orf85-201ENST00000334731 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
C9orf85-201ENST00000334731 ZBTB43O43298 467 aa12.9□□□□□ -0.34
C9orf85-201ENST00000334731 PFKMP08237 780 aa12.9□□□□□ -0.34
C9orf85-201ENST00000334731 HMGB1P09429 215 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms