RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 QRICH1Q2TAL8 776 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 DESI1Q6ICB0 168 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 KLHL10Q6JEL2 608 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CABP7Q86V35 215 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 AGBL3Q8NEM8 1001 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 DPF2Q92785 391 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CUEDC2Q9H467 287 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 PSTPIP2Q9H939 334 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 MAGEF1Q9HAY2 307 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CLRN2A0PK11 232 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 NRDCO43847 1150 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 NDUFB10O96000 172 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SKILP12757 684 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 TECP42680 631 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CCZ1BP86790 482 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 CDC37Q16543 378 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 UBE2SQ16763 222 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 NAALADL2Q58DX5 795 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 ZNF658Q5TYW1 1059 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 FKBP1CQ5VVH2 108 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SPATA1Q5VX52 437 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 VSTM4Q8IW00 320 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SMYD4Q8IYR2 804 aaPredicted RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 MTMR14Q8NCE2 650 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 MTMR9Q96QG7 549 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 MED15Q96RN5 788 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 KRTAP4-8Q9BYQ9 185 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 RAB34Q9BZG1 259 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SAMSN1Q9NSI8 373 aaKnown RBP9.8□□□□□ -0.84
LSAMP-201ENST00000333617 KBTBD4Q9NVX7 518 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 SYNPO2Q9UMS6 1093 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 PCDHA1Q9Y5I3 950 aa9.8□□□□□ -0.84
LSAMP-201ENST00000333617 RBBP6Q7Z6E9 1792 aaKnown RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 CNTNAP1P78357 1384 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 ZBTB7AO95365 584 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 TDP2O95551 362 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 BMP3P12645 472 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 GCFC2P16383 781 aaKnown RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 SMPD1P17405 629 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 PLCG1P19174 1290 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 POLD1P28340 1107 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 TXKP42681 527 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 STX17P56962 302 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 JAG1P78504 1218 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 INSM1Q01101 510 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 SEMA3FQ13275 785 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 RRP1BQ14684 758 aaKnown RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 HSP90AA4PQ58FG1 418 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 DALRD3Q5D0E6 543 aaKnown RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 SYDE2Q5VT97 1194 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 PPP4R3AQ6IN85 833 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 IGSF22Q8N9C0 903 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 CALML4Q96GE6 196 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 PLIN2Q99541 437 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 NAP1L4Q99733 375 aaKnown RBP9.79□□□□□ -0.84
LSAMP-201ENST00000333617 VEZTQ9HBM0 779 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 CTNND2Q9UQB3 1225 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 WDR81Q562E7 1941 aa9.79□□□□□ -0.84
LSAMP-201ENST00000333617 PARP14Q460N5 1801 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 AXIN1O15169 862 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 SLC37A4O43826 429 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 EDIL3O43854 480 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 TPM2P07951 284 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-201ENST00000333617 PDIA5Q14554 519 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 KCNB1Q14721 858 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 TPD52L1Q16890 204 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-201ENST00000333617 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 FAM83AQ86UY5 434 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 NUP88Q99567 741 aaPredicted RBP9.78□□□□□ -0.84
LSAMP-201ENST00000333617 AMNQ9BXJ7 453 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 EVA1BQ9NVM1 165 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 LRWD1Q9UFC0 647 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 DDX25Q9UHL0 483 aaKnown RBP9.78□□□□□ -0.84
LSAMP-201ENST00000333617 RWDD2AQ9UIY3 292 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 DOCK1Q14185 1865 aa9.78□□□□□ -0.84
LSAMP-201ENST00000333617 A0A1W2PRG0 241 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 KLRC4O43908 158 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 AMPD3Q01432 767 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CXCL9Q07325 125 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 PAK1Q13153 545 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CDKAL1Q5VV42 579 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 BTNL9Q6UXG8 535 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 FBXO11Q86XK2 927 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CCDC125Q86Z20 511 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 LRRC15Q8TF66 581 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 NELFBQ8WX92 580 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 JDP2Q8WYK2 163 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CCDC47Q96A33 483 aaKnown RBP9.77□□□□□ -0.85
LSAMP-201ENST00000333617 CTAGE1Q96RT6 745 aa9.77□□□□□ -0.85
LSAMP-201ENST00000333617 MMTAG2Q9BU76 263 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms