RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ANKRD20A8PQ5CZ79 823 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 TTC38Q5R3I4 469 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 FANCBQ8NB91 859 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 GSG1L2A8MUP6 293 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 PRLRP16471 622 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 MTIF2P46199 727 aaKnown RBP19.99■□□□□ 0.79
PKP3-201ENST00000331563 RNASE9P60153 205 aaKnown RBP19.99■□□□□ 0.79
PKP3-201ENST00000331563 SLC4A8Q2Y0W8 1093 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 THSD7AQ9UPZ6 1657 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 LRP5O75197 1615 aa19.99■□□□□ 0.79
PKP3-201ENST00000331563 GCOM1H8Y6P7 765 aaPredicted RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 MYZAPP0CAP1 466 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 SRGNP10124 158 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 PPP4R3AQ6IN85 833 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 ZNF572Q7Z3I7 529 aaPredicted RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 CACNA2D3Q8IZS8 1091 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 PSMA7O14818 248 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 TNFRSF8P28908 595 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 SCTRP47872 440 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 DYNLL1P63167 89 aaKnown RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 GLE1Q53GS7 698 aaKnown RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 CSGALNACT2Q8N6G5 542 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 HOMER3Q9NSC5 361 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 ENO4A6NNW6 628 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 BUB1O43683 1085 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 BUB1BO60566 1050 aaPredicted RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 TMOD1P28289 359 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 EVX2Q03828 476 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 IFFO1Q0D2I5 559 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 SNX1Q13596 522 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 PDXDC2PQ6P474 469 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 SPDYE1Q8NFV5 336 aaPredicted RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 HOOK2Q96ED9 719 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 PAIP2Q9BPZ3 127 aaKnown RBP19.98■□□□□ 0.79
PKP3-201ENST00000331563 KRT23Q9C075 422 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 RPS6KL1Q9Y6S9 549 aa19.98■□□□□ 0.79
PKP3-201ENST00000331563 COL1A1P02452 1464 aaPredicted RBP19.97■□□□□ 0.79
PKP3-201ENST00000331563 CYP2D7A0A087X1C5 515 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 TM4SF1P30408 202 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 MCM7P33993 719 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 STAT6P42226 847 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 QPCTQ16769 361 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 CPLX4Q7Z7G2 160 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 PIK3R5Q8WYR1 880 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 KRT12Q99456 494 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 NYXQ9GZU5 481 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 MINDY4BA8MYZ0 360 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 SLC10A5Q5PT55 438 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 AKNAD1Q5T1N1 836 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 ZNF654Q8IZM8 581 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 ADSSL1Q8N142 457 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 RETREG2Q8NC44 543 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 ZNF526Q8TF50 670 aaPredicted RBP19.97■□□□□ 0.79
PKP3-201ENST00000331563 ZNF384Q8TF68 577 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 SEC16BQ96JE7 1060 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 THAP9Q9H5L6 903 aa19.97■□□□□ 0.79
PKP3-201ENST00000331563 KIF11P52732 1056 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 PSMD2Q13200 908 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 PDCD2Q16342 344 aaPredicted RBP19.96■□□□□ 0.79
PKP3-201ENST00000331563 BCORQ6W2J9 1755 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 ECM29Q5VYK3 1845 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 PRPHP41219 470 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 PPP1R7Q15435 360 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 SLC5A9Q2M3M2 681 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 NOC4LQ9BVI4 516 aaKnown RBP19.96■□□□□ 0.79
PKP3-201ENST00000331563 GDF3Q9NR23 364 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 MYH10P35580 1976 aa19.96■□□□□ 0.79
PKP3-201ENST00000331563 ONECUT3O60422 494 aaPredicted RBP19.95■□□□□ 0.78
PKP3-201ENST00000331563 MAGEA1P43355 309 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 SF3A3Q12874 501 aaKnown RBP eCLIP19.95■□□□□ 0.785e-6■■■■□ 19.6
PKP3-201ENST00000331563 UBE4AQ14139 1066 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 TRADDQ15628 312 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 ACCSLQ4AC99 568 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 HIBCHQ6NVY1 386 aaPredicted RBP19.95■□□□□ 0.78
PKP3-201ENST00000331563 OR2W6PQ8NHA6 318 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 PYM1Q9BRP8 204 aaKnown RBP19.95■□□□□ 0.78
PKP3-201ENST00000331563 LEMD3Q9Y2U8 911 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 CLSTN1O94985 981 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 EIF4A3P38919 411 aaKnown RBP19.95■□□□□ 0.78
PKP3-201ENST00000331563 CD302Q8IX05 232 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 HVCN1Q96D96 273 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 TTYH3Q9C0H2 523 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 ANKIB1Q9P2G1 1089 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
PKP3-201ENST00000331563 SRCAPQ6ZRS2 3230 aa19.95■□□□□ 0.78
PKP3-201ENST00000331563 RAB27AP51159 221 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 EMC10Q5UCC4 262 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 GKAP1Q5VSY0 366 aaPredicted RBP19.94■□□□□ 0.78
PKP3-201ENST00000331563 WHAMMQ8TF30 809 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 CASKIN2Q8WXE0 1202 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 PLIN2Q99541 437 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 FAM207AQ9NSI2 230 aaPredicted RBP19.94■□□□□ 0.78
PKP3-201ENST00000331563 RASSF10A6NK89 507 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 PRDX5P30044 214 aa19.94■□□□□ 0.78
PKP3-201ENST00000331563 MYO1EQ12965 1108 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms