RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
BEST3-203ENST00000331471 YBX2Q9Y2T7 364 aaKnown RBP10.29□□□□□ -0.76
BEST3-203ENST00000331471 PARP1P09874 1014 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 ACTN1P12814 892 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 NFRKBQ6P4R8 1299 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 SEPT14Q6ZU15 432 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 MCF2L2Q86YR7 1114 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 ADGRF4Q8IZF3 695 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 PHOX2BQ99453 314 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 UBAC1Q9BSL1 405 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 DSCC1Q9BVC3 393 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 REPIN1Q9BWE0 567 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 KRT23Q9C075 422 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 VAT1LQ9HCJ6 419 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 CTNNA3Q9UI47 895 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 GBF1Q92538 1859 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 A6NJR5 290 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 ARIH2O95376 493 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 GH1P01241 217 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 RFC2P35250 354 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 PTPN11Q06124 597 aaPredicted RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 CCDC85BQ15834 202 aaPredicted RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 QRICH1Q2TAL8 776 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 IFIT1BQ5T764 474 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 ARHGEF16Q5VV41 709 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 FBXO11Q86XK2 927 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 ENAHQ8N8S7 591 aaPredicted RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 SYTL5Q8TDW5 730 aaPredicted RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 NSUN6Q8TEA1 469 aaKnown RBP10.28□□□□□ -0.76
BEST3-203ENST00000331471 TAAR1Q96RJ0 339 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 RMDN3Q96TC7 470 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
BEST3-203ENST00000331471 CNNM2Q9H8M5 875 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
BEST3-203ENST00000331471 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 MMP3P08254 477 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 MYOGP15173 224 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 BFSP2Q13515 415 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 ADGRE1Q14246 886 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 STXBP2Q15833 593 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 LY6KQ17RY6 165 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 CHST3Q7LGC8 479 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 MICALL1Q8N3F8 863 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 CCDC155Q8N6L0 562 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 AFG1LQ8WV93 481 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 TBC1D5Q92609 795 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 IWS1Q96ST2 819 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 MAF1Q9H063 256 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 ZSWIM5Q9P217 1185 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 THEGQ9P2T0 379 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.77
BEST3-203ENST00000331471 VCANP13611 3396 aa10.27□□□□□ -0.77
BEST3-203ENST00000331471 TANC1Q9C0D5 1861 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 CFBP00751 764 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 IQCF3P0C7M6 154 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 EIF2AK2P19525 551 aaKnown RBP10.26□□□□□ -0.77
BEST3-203ENST00000331471 CASTP20810 708 aaKnown RBP10.26□□□□□ -0.77
BEST3-203ENST00000331471 PTGISQ16647 500 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 TMEM67Q5HYA8 995 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 HSCBQ8IWL3 235 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 SLC9A7Q96T83 725 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 CHMP5Q9NZZ3 219 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 COL20A1Q9P218 1284 aa10.26□□□□□ -0.77
BEST3-203ENST00000331471 ARHGAP1Q07960 439 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 TRDNQ13061 729 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 DGKDQ16760 1214 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 CCDC62Q6P9F0 684 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
BEST3-203ENST00000331471 VWCEQ96DN2 955 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 AMNQ9BXJ7 453 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 PXMP2Q9NR77 195 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 SCN10AQ9Y5Y9 1956 aa10.25□□□□□ -0.77
BEST3-203ENST00000331471 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 KIF28PB7ZC32 967 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 TNFRSF10AO00220 468 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 CDC45O75419 566 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
BEST3-203ENST00000331471 CA3P07451 260 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 MYCLP12524 364 aaPredicted RBP10.24□□□□□ -0.77
BEST3-203ENST00000331471 DDIT3P35638 169 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 KCNJ6P48051 423 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 GDF6Q6KF10 455 aaPredicted RBP10.24□□□□□ -0.77
BEST3-203ENST00000331471 STAG2Q8N3U4 1231 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 C7orf31Q8N865 590 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 CAGE1Q8TC20 777 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 PHOSPHO2Q8TCD6 241 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 AFAP1L1Q8TED9 768 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 NLRP7Q8WX94 980 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 ALG1Q9BT22 464 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 KATNAL1Q9BW62 490 aa10.24□□□□□ -0.77
BEST3-203ENST00000331471 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms