RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SUGCTQ9HAC7 445 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 DISC1Q9NRI5 854 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 PPP1R9AQ9ULJ8 1098 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 IPO5O00410 1097 aaKnown RBP17.7■□□□□ 0.42
PDGFB-201ENST00000331163 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 LPAR1Q92633 364 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 CPA4Q9UI42 421 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 MAN1B1Q9UKM7 699 aa17.7■□□□□ 0.42
PDGFB-201ENST00000331163 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 TEX13BQ9BXU2 312 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 PHF20L1A8MW92 1017 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 VWA5AO00534 786 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 NRDCO43847 1150 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
PDGFB-201ENST00000331163 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
PDGFB-201ENST00000331163 ZNF75DP51815 510 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 IL17AQ16552 155 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 MYCT1Q8N699 235 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 MKL1Q969V6 931 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 VTI1AQ96AJ9 217 aa17.69■□□□□ 0.42
PDGFB-201ENST00000331163 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
PDGFB-201ENST00000331163 MEIS2O14770 477 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 POLR3GO15318 223 aaPredicted RBP17.68■□□□□ 0.42
PDGFB-201ENST00000331163 FAM13AO94988 1023 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 FCER1AP12319 257 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 KIAA1683Q9H0B3 1180 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 DACH1Q9UI36 760 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 ARHGEF35A5YM69 484 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 SKILP12757 684 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 LARP4BQ92615 738 aaKnown RBP17.68■□□□□ 0.42
PDGFB-201ENST00000331163 DYDC2Q96IM9 177 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 FUCA2Q9BTY2 467 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 RPN1P04843 607 aaKnown RBP17.68■□□□□ 0.42
PDGFB-201ENST00000331163 NLRP12P59046 1061 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 ERO1BQ86YB8 467 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 KRT222Q8N1A0 295 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 TAB2Q9NYJ8 693 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
PDGFB-201ENST00000331163 COL11A2P13942 1736 aaPredicted RBP17.68■□□□□ 0.42
PDGFB-201ENST00000331163 CCDC40Q4G0X9 1142 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 CEP55Q53EZ4 464 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 XKR9Q5GH70 373 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 ENGASEQ8NFI3 743 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 GCNT3O95395 438 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 HTRA3P83110 453 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 Q3C1V9 767 aa17.67■□□□□ 0.42
PDGFB-201ENST00000331163 ASCC2Q9H1I8 757 aaPredicted RBP17.67■□□□□ 0.42
PDGFB-201ENST00000331163 MYL5Q02045 173 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 ARID5AQ03989 594 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 TMEM132BQ14DG7 1078 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 FILIP1LQ4L180 1135 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 NELFBQ8WX92 580 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 PSMA7O14818 248 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 FAM212AQ96EL1 285 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 BICD1Q96G01 975 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 ACAD9Q9H845 621 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 MRPL44Q9H9J2 332 aaKnown RBP17.66■□□□□ 0.42
PDGFB-201ENST00000331163 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
PDGFB-201ENST00000331163 ICAM1P05362 532 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 NR3C2P08235 984 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 SNHG28P0DPA3 235 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 OSBPP22059 807 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 GJC2Q5T442 439 aaPredicted RBP17.66■□□□□ 0.42
PDGFB-201ENST00000331163 USP50Q70EL3 339 aaPredicted RBP17.66■□□□□ 0.42
PDGFB-201ENST00000331163 CYFIP1Q7L576 1253 aa17.66■□□□□ 0.42
PDGFB-201ENST00000331163 SRRTQ9BXP5 876 aaKnown RBP17.66■□□□□ 0.42
PDGFB-201ENST00000331163 MSH4O15457 936 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 PSMC6P62333 389 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 KMT5BQ4FZB7 885 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 DDX12PQ92771 950 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 TEKT3Q9BXF9 490 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 XPO4Q9C0E2 1151 aaKnown RBP17.65■□□□□ 0.42
PDGFB-201ENST00000331163 SNCAIPQ9Y6H5 919 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 METTL13Q8N6R0 699 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 TCHPQ9BT92 498 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 KCNH7Q9NS40 1196 aa17.65■□□□□ 0.42
PDGFB-201ENST00000331163 C19orf81C9J6K1 198 aa17.64■□□□□ 0.42
PDGFB-201ENST00000331163 HERVK_113P62684 666 aa17.64■□□□□ 0.42
PDGFB-201ENST00000331163 TAF1CQ15572 869 aaPredicted RBP17.64■□□□□ 0.42
PDGFB-201ENST00000331163 CSGALNACT2Q8N6G5 542 aa17.64■□□□□ 0.42
PDGFB-201ENST00000331163 CRACR2AQ9BSW2 395 aa17.64■□□□□ 0.42
PDGFB-201ENST00000331163 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.42
PDGFB-201ENST00000331163 SNAPC2Q13487 334 aa17.64■□□□□ 0.41
PDGFB-201ENST00000331163 MTERF2Q49AM1 385 aa17.64■□□□□ 0.41
PDGFB-201ENST00000331163 DCAF17Q5H9S7 520 aaPredicted RBP17.64■□□□□ 0.41
PDGFB-201ENST00000331163 KCNK18Q7Z418 384 aa17.64■□□□□ 0.41
PDGFB-201ENST00000331163 COL20A1Q9P218 1284 aa17.64■□□□□ 0.41
PDGFB-201ENST00000331163 DDX41Q9UJV9 622 aaKnown RBP17.64■□□□□ 0.41
PDGFB-201ENST00000331163 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms