RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TMTC2Q8N394 836 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 MARCH10Q8NA82 808 aaPredicted RBP22.57■■□□□ 1.2
CMTM4-201ENST00000330687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.57■■□□□ 1.24e-7■■□□□ 14.2
CMTM4-201ENST00000330687 HEG1Q9ULI3 1381 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 BICDL2A1A5D9 508 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 TTI1O43156 1089 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 UBOX5O94941 541 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 ITGA4P13612 1032 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 DRD4P21917 467 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 INHBEP58166 350 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 PLCB1Q9NQ66 1216 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 INTS9Q9NV88 658 aaKnown RBP22.57■■□□□ 1.2
CMTM4-201ENST00000330687 TBC1D7Q9P0N9 293 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 SWAP70Q9UH65 585 aa22.57■■□□□ 1.2
CMTM4-201ENST00000330687 F8W031 263 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-201ENST00000330687 MKRN4PQ13434 485 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-201ENST00000330687 SLC9C1Q4G0N8 1177 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 FAM47AQ5JRC9 791 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 TRIM51Q9BSJ1 452 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-201ENST00000330687 CIAO1O76071 339 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 PRLRP16471 622 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 HSPA9P38646 679 aaKnown RBP22.56■■□□□ 1.2
CMTM4-201ENST00000330687 ALDH5A1P51649 535 aaPredicted RBP22.56■■□□□ 1.2
CMTM4-201ENST00000330687 MIIPQ5JXC2 388 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 PAGR1Q9BTK6 254 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 OSBPL1AQ9BXW6 950 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 TMEM60Q9H2L4 133 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 AGAP1Q9UPQ3 857 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 H0Y3Z8 333 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 PLCG1P19174 1290 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 EPS15P42566 896 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 ITIH3Q06033 890 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 SEMA3FQ13275 785 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 STAG2Q8N3U4 1231 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 FAM133AQ8N9E0 248 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 ETAA1Q9NY74 926 aa22.56■■□□□ 1.2
CMTM4-201ENST00000330687 VWA3BQ502W6 1294 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 LRP10Q7Z4F1 713 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 CCDC25Q86WR0 208 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 ECT2Q9H8V3 914 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 LUC7LQ9NQ29 371 aaKnown RBP22.55■■□□□ 1.2
CMTM4-201ENST00000330687 PHKG2P15735 406 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 CHRNA2Q15822 529 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 IFNL2Q8IZJ0 200 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 ENAHQ8N8S7 591 aaPredicted RBP22.55■■□□□ 1.2
CMTM4-201ENST00000330687 USP38Q8NB14 1042 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 TECPR2O15040 1411 aa22.55■■□□□ 1.2
CMTM4-201ENST00000330687 MXRA7P84157 204 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 BIRC3Q13489 604 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 DZIP3Q86Y13 1208 aaKnown RBP22.54■■□□□ 1.2
CMTM4-201ENST00000330687 ANKRD42Q8N9B4 389 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.54■■□□□ 1.2
CMTM4-201ENST00000330687 PPP1R12CQ9BZL4 782 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 ARHGEF10LQ9HCE6 1279 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 MRC1P22897 1456 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 ORC4O43929 436 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 SNUPNO95149 360 aaKnown RBP22.54■■□□□ 1.2
CMTM4-201ENST00000330687 NAALADL2Q58DX5 795 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 TRPM8Q7Z2W7 1104 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 ZHX3Q9H4I2 956 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 A0A0G2JS52 829 aa22.54■■□□□ 1.2
CMTM4-201ENST00000330687 CYP7A1P22680 504 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 KIF5BP33176 963 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 KLHL30Q0D2K2 578 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 LLGL1Q15334 1064 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 SFMBT2Q5VUG0 894 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 CD302Q8IX05 232 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 RNF41Q9H4P4 317 aaPredicted RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 PPIP5K2O43314 1243 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 GIMAP8Q8ND71 665 aaPredicted RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 TTLL11Q8NHH1 800 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 CCDC26Q8TAB7 109 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 TSC22D3Q99576 134 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 LSM14BQ9BX40 385 aaKnown RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 AZI2Q9H6S1 392 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 TNRQ92752 1358 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 DNAJC8O75937 253 aaPredicted RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 CTCFP49711 727 aaPredicted RBP22.53■■□□□ 1.2
CMTM4-201ENST00000330687 PLTPP55058 493 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 SESN3P58005 492 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 ADCY2Q08462 1091 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 ISCUQ9H1K1 167 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 KDM4CQ9H3R0 1056 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 BATF3Q9NR55 127 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 TCP11L1Q9NUJ3 509 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 TSKSQ9UJT2 592 aa22.53■■□□□ 1.2
CMTM4-201ENST00000330687 A0A087X0T9 212 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 FAM228BP0C875 321 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 LETM2Q2VYF4 491 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 MIS18BP1Q6P0N0 1132 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 SPATA5Q8NB90 893 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 PYM1Q9BRP8 204 aaKnown RBP22.52■■□□□ 1.2
CMTM4-201ENST00000330687 RGS16O15492 202 aaPredicted RBP22.52■■□□□ 1.2
CMTM4-201ENST00000330687 RUBCNQ92622 972 aa22.52■■□□□ 1.2
CMTM4-201ENST00000330687 DHTKD1Q96HY7 919 aaPredicted RBP22.52■■□□□ 1.2
CMTM4-201ENST00000330687 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.19
CMTM4-201ENST00000330687 GNAT1P11488 350 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms