RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 MCM5P33992 734 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 PBX2P40425 430 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 PTPN11Q06124 597 aaPredicted RBP16.97■□□□□ 0.31
TSPO-201ENST00000329563 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 NFRKBQ6P4R8 1299 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 OTOP2Q7RTS6 562 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 SPZ1Q9BXG8 430 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 BCAS3Q9H6U6 928 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 SLC4A7Q9Y6M7 1214 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 CHD9Q3L8U1 2897 aa16.97■□□□□ 0.31
TSPO-201ENST00000329563 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
TSPO-201ENST00000329563 SORBS3O60504 671 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 RFC2P35250 354 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 NEK4P51957 841 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.31
TSPO-201ENST00000329563 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 NOD1Q9Y239 953 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 MRVI1Q9Y6F6 885 aa16.96■□□□□ 0.31
TSPO-201ENST00000329563 MYH7BA7E2Y1 1941 aa16.96■□□□□ 0.3
TSPO-201ENST00000329563 FRMPD4Q14CM0 1322 aa16.96■□□□□ 0.3
TSPO-201ENST00000329563 ZBBXA8MT70 800 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 RPS6KB1P23443 525 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 LIFRP42702 1097 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 MCM2P49736 904 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 MRPS9P82933 396 aaKnown RBP16.95■□□□□ 0.3
TSPO-201ENST00000329563 ANKRD1Q15327 319 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
TSPO-201ENST00000329563 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
TSPO-201ENST00000329563 hCG_1642624A0A1W2PR95 340 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 MEIS2O14770 477 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 ZNF286BP0CG31 522 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 UBA1P22314 1058 aaKnown RBP16.94■□□□□ 0.3
TSPO-201ENST00000329563 SMARCA1P28370 1054 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 CHMP4BP1P59074 171 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 EXOSC10Q01780 885 aaKnown RBP16.94■□□□□ 0.3
TSPO-201ENST00000329563 BFSP2Q13515 415 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 HIC1Q14526 733 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 TJAP1Q5JTD0 557 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 GDF6Q6KF10 455 aaPredicted RBP16.94■□□□□ 0.3
TSPO-201ENST00000329563 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 NFXL1Q6ZNB6 911 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 PDRG1Q9NUG6 133 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 PCDHA11Q9Y5I1 949 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 TRIP12Q14669 1992 aaPredicted RBP16.94■□□□□ 0.3
TSPO-201ENST00000329563 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
TSPO-201ENST00000329563 SPTBN5Q9NRC6 3674 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 CCDC69A6NI79 296 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 HOXD8P13378 290 aaPredicted RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 ANP32AP39687 249 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 FGD1P98174 961 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 TRAF1Q13077 416 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 CELF3Q5SZQ8 465 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 FBXL16Q8N461 479 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 PPTC7Q8NI37 304 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 DHX38Q92620 1227 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 PRDM12Q9H4Q4 367 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
TSPO-201ENST00000329563 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
TSPO-201ENST00000329563 HAS3O00219 553 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 GGPS1O95749 300 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 F2P00734 622 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 ATP2A2P16615 1042 aaKnown RBP16.92■□□□□ 0.3
TSPO-201ENST00000329563 CCND2P30279 289 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 KIF5BP33176 963 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 GPNMBQ14956 572 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 DGKDQ16760 1214 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 SESTD1Q86VW0 696 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 NKX2-4Q9H2Z4 354 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 CHD7Q9P2D1 2997 aa16.92■□□□□ 0.3
TSPO-201ENST00000329563 PIK3CDO00329 1044 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 IGFBP4P22692 258 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 PSEN2P49810 448 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 PTGISQ16647 500 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 DEFB128Q7Z7B8 93 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 MICU3Q86XE3 530 aa16.91■□□□□ 0.3
TSPO-201ENST00000329563 CAGE1Q8TC20 777 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms