RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 LRRC55Q6ZSA7 311 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 SYN2Q92777 582 aaPredicted RBP22.04■■□□□ 1.12
SOX2-201ENST00000325404 CAPZA3Q96KX2 299 aa22.04■■□□□ 1.12
SOX2-201ENST00000325404 G3V3G9 751 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 SYF2O95926 243 aaKnown RBP22.03■■□□□ 1.12
SOX2-201ENST00000325404 DCAF8Q5TAQ9 597 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 ALS2CR12Q96Q35 445 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 MTMR4Q9NYA4 1195 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 MACROD2A1Z1Q3 448 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 PRPF6O94906 941 aaKnown RBP22.03■■□□□ 1.12
SOX2-201ENST00000325404 SLC20A2Q08357 652 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 RNF10Q8N5U6 811 aaKnown RBP22.03■■□□□ 1.12
SOX2-201ENST00000325404 BAP1Q92560 729 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 VAT1LQ9HCJ6 419 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 TMEM260Q9NX78 707 aa22.03■■□□□ 1.12
SOX2-201ENST00000325404 IGKV6D-41A0A0C4DH26 115 aa22.02■■□□□ 1.12
SOX2-201ENST00000325404 EDIL3O43854 480 aa22.02■■□□□ 1.12
SOX2-201ENST00000325404 EIF4A3P38919 411 aaKnown RBP22.02■■□□□ 1.12
SOX2-201ENST00000325404 BAG6P46379 1132 aa22.02■■□□□ 1.12
SOX2-201ENST00000325404 DOK7Q18PE1 504 aa22.02■■□□□ 1.12
SOX2-201ENST00000325404 EEF2KMTQ96G04 330 aa22.02■■□□□ 1.12
SOX2-201ENST00000325404 IRX5P78411 483 aaPredicted RBP22.02■■□□□ 1.11
SOX2-201ENST00000325404 ASTE1Q2TB18 679 aaPredicted RBP22.02■■□□□ 1.11
SOX2-201ENST00000325404 GOLGA6L1Q8N7Z2 621 aa22.02■■□□□ 1.11
SOX2-201ENST00000325404 HPS3Q969F9 1004 aa22.02■■□□□ 1.11
SOX2-201ENST00000325404 CNKSR1Q969H4 720 aa22.02■■□□□ 1.11
SOX2-201ENST00000325404 NAP1L4Q99733 375 aaKnown RBP22.02■■□□□ 1.11
SOX2-201ENST00000325404 FAM184BQ9ULE4 1060 aa22.02■■□□□ 1.11
SOX2-201ENST00000325404 MYO3BQ8WXR4 1341 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 RBAK-RBAKDNI3L0D1 243 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 RNF40O75150 1001 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 HYIQ5T013 277 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 PDXDC1Q6P996 788 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 AENQ8WTP8 325 aaKnown RBP22.01■■□□□ 1.11
SOX2-201ENST00000325404 TSKSQ9UJT2 592 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 HYOU1Q9Y4L1 999 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 SLC37A4O43826 429 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 GCFC2P16383 781 aaKnown RBP22.01■■□□□ 1.11
SOX2-201ENST00000325404 GABPAQ06546 454 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 KRT26Q7Z3Y9 468 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 SNX29Q8TEQ0 813 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 UBA5Q9GZZ9 404 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 DEF6Q9H4E7 631 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 MMRN2Q9H8L6 949 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 QSER1Q2KHR3 1735 aa22.01■■□□□ 1.11
SOX2-201ENST00000325404 FOCADQ5VW36 1801 aa22■■□□□ 1.11
SOX2-201ENST00000325404 PNMA6FA0A0J9YX94 578 aa22■■□□□ 1.11
SOX2-201ENST00000325404 NKRFO15226 690 aaKnown RBP eCLIP22■■□□□ 1.11
SOX2-201ENST00000325404 ZNF185O15231 689 aa22■■□□□ 1.11
SOX2-201ENST00000325404 AKR1B10O60218 316 aa22■■□□□ 1.11
SOX2-201ENST00000325404 PLEKP08567 350 aaPredicted RBP22■■□□□ 1.11
SOX2-201ENST00000325404 CHRNA5P30532 468 aa22■■□□□ 1.11
SOX2-201ENST00000325404 TNNT3P45378 269 aaPredicted RBP22■■□□□ 1.11
SOX2-201ENST00000325404 CLK2P49760 499 aaKnown RBP22■■□□□ 1.11
SOX2-201ENST00000325404 ZCWPW2Q504Y3 356 aa22■■□□□ 1.11
SOX2-201ENST00000325404 DDX12PQ92771 950 aa22■■□□□ 1.11
SOX2-201ENST00000325404 CEP63Q96MT8 703 aa22■■□□□ 1.11
SOX2-201ENST00000325404 FAM204AQ9H8W3 233 aa22■■□□□ 1.11
SOX2-201ENST00000325404 FAM207AQ9NSI2 230 aaPredicted RBP22■■□□□ 1.11
SOX2-201ENST00000325404 RNF14Q9UBS8 474 aa22■■□□□ 1.11
SOX2-201ENST00000325404 DAGLAQ9Y4D2 1042 aa22■■□□□ 1.11
SOX2-201ENST00000325404 EPHB6O15197 1021 aa22■■□□□ 1.11
SOX2-201ENST00000325404 GNA14O95837 355 aa22■■□□□ 1.11
SOX2-201ENST00000325404 MYOCDQ8IZQ8 938 aa22■■□□□ 1.11
SOX2-201ENST00000325404 AFAP1L1Q8TED9 768 aa22■■□□□ 1.11
SOX2-201ENST00000325404 CRACR2AQ9BSW2 395 aa22■■□□□ 1.11
SOX2-201ENST00000325404 SELENOOQ9BVL4 669 aa22■■□□□ 1.11
SOX2-201ENST00000325404 CAPN6Q9Y6Q1 641 aa22■■□□□ 1.11
SOX2-201ENST00000325404 LRRC53A6NM62 1247 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 TDP2O95551 362 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 MAGEA1P43355 309 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 FKBP3Q00688 224 aaKnown RBP21.99■■□□□ 1.11
SOX2-201ENST00000325404 TNFRSF8P28908 595 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 MARSP56192 900 aaKnown RBP21.99■■□□□ 1.11
SOX2-201ENST00000325404 RRAGAQ7L523 313 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 CERS5Q8N5B7 392 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 DNAJC19Q96DA6 116 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 OSBPL9Q96SU4 736 aa21.99■■□□□ 1.11
SOX2-201ENST00000325404 GLE1Q53GS7 698 aaKnown RBP21.98■■□□□ 1.11
SOX2-201ENST00000325404 DYMQ7RTS9 669 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 PODNQ7Z5L7 613 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 SPATA4Q8NEY3 305 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 NT5C3AQ9H0P0 336 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 CEP72Q9P209 647 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 COL4A3BPQ9Y5P4 624 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 KDM3AQ9Y4C1 1321 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 F8W031 263 aaPredicted RBP21.98■■□□□ 1.11
SOX2-201ENST00000325404 CLSTN1O94985 981 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 COA7Q96BR5 231 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 GLT8D2Q9H1C3 349 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 SWAP70Q9UH65 585 aa21.98■■□□□ 1.11
SOX2-201ENST00000325404 C2orf54Q08AI8 447 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 ZNF543Q08ER8 600 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 LUC7LQ9NQ29 371 aaKnown RBP21.97■■□□□ 1.11
SOX2-201ENST00000325404 BMP2KQ9NSY1 1161 aaPredicted RBP21.97■■□□□ 1.11
SOX2-201ENST00000325404 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
SOX2-201ENST00000325404 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
SOX2-201ENST00000325404 MOCS3O95396 460 aa21.97■■□□□ 1.11
SOX2-201ENST00000325404 MRPL12P52815 198 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms