RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 DHX16O60231 1041 aaKnown RBP16.55■□□□□ 0.24
RPP40-201ENST00000319533 LPXNO60711 386 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
RPP40-201ENST00000319533 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 CFBP00751 764 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
RPP40-201ENST00000319533 GRB10Q13322 594 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 MFSD10Q14728 455 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 IFIT1BQ5T764 474 aaKnown RBP16.55■□□□□ 0.24
RPP40-201ENST00000319533 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 KCNV1Q6PIU1 500 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 DHX37Q8IY37 1157 aaKnown RBP16.55■□□□□ 0.24
RPP40-201ENST00000319533 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 LMCD1Q9NZU5 365 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 MAD2L2Q9UI95 211 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 MRVI1Q9Y6F6 885 aa16.55■□□□□ 0.24
RPP40-201ENST00000319533 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 ZBTB5O15062 677 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 TCTN1Q2MV58 587 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 KRT40Q6A162 431 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 IL25Q9H293 177 aa16.54■□□□□ 0.24
RPP40-201ENST00000319533 TCF20Q9UGU0 1960 aaKnown RBP16.53■□□□□ 0.24
RPP40-201ENST00000319533 LCHNA4D1U4 455 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 EFCAB14O75071 495 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 GJB5O95377 273 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 TGFB3P10600 412 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 KCNQ1P51787 676 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 DEFB103AP81534 67 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 MBTPS1Q14703 1052 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 SLC35G1Q2M3R5 365 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 CELF3Q5SZQ8 465 aaKnown RBP16.53■□□□□ 0.24
RPP40-201ENST00000319533 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 SPRED2Q7Z698 418 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 WNT8BQ93098 351 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 NECAB3Q96P71 396 aaPredicted RBP16.53■□□□□ 0.24
RPP40-201ENST00000319533 ALG1Q9BT22 464 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 PCDHA1Q9Y5I3 950 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 MYH7BA7E2Y1 1941 aa16.53■□□□□ 0.24
RPP40-201ENST00000319533 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 HOXC8P31273 242 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 TRAF1Q13077 416 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 HIC1Q14526 733 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 PGM5Q15124 567 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
RPP40-201ENST00000319533 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 ZNF618Q5T7W0 954 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 RAD9AQ99638 391 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 C16orf70Q9BSU1 422 aa16.52■□□□□ 0.24
RPP40-201ENST00000319533 COL4A4P53420 1690 aaPredicted RBP16.51■□□□□ 0.23
RPP40-201ENST00000319533 ERVK-21P61565 698 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 SP2Q02086 613 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 IKBKEQ14164 716 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 GRM4Q14833 912 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
RPP40-201ENST00000319533 SERINC5Q86VE9 423 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 HLA-CQ95604 372 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 SPATA33Q96N06 139 aa16.51■□□□□ 0.23
RPP40-201ENST00000319533 FRMPD4Q14CM0 1322 aa16.5■□□□□ 0.23
RPP40-201ENST00000319533 GGPS1O95749 300 aa16.5■□□□□ 0.23
RPP40-201ENST00000319533 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
RPP40-201ENST00000319533 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
RPP40-201ENST00000319533 HOXA13P31271 388 aaPredicted RBP16.5■□□□□ 0.23
RPP40-201ENST00000319533 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
RPP40-201ENST00000319533 TGS1Q96RS0 853 aaKnown RBP16.5■□□□□ 0.23
RPP40-201ENST00000319533 ZBED2Q9BTP6 218 aa16.5■□□□□ 0.23
RPP40-201ENST00000319533 EMSYQ7Z589 1322 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 LINC01553A4QN01 128 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
RPP40-201ENST00000319533 CYTH3O43739 400 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 LGR5O75473 907 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 CCND2P30279 289 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 ICAM3P32942 547 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 TROAPQ12815 778 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 PIGSQ96S52 555 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 C1QTNF1Q9BXJ1 281 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 SUGCTQ9HAC7 445 aa16.49■□□□□ 0.23
RPP40-201ENST00000319533 BRWD1Q9NSI6 2320 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 STAM2O75886 525 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 CYP21A2P08686 494 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
RPP40-201ENST00000319533 TRDNQ13061 729 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
RPP40-201ENST00000319533 GDPD5Q8WTR4 605 aa16.48■□□□□ 0.23
RPP40-201ENST00000319533 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
RPP40-201ENST00000319533 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 H3BRB1 525 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 PDE4AP27815 886 aa16.47■□□□□ 0.23
RPP40-201ENST00000319533 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
RPP40-201ENST00000319533 HTRA4P83105 476 aaPredicted RBP16.47■□□□□ 0.23
RPP40-201ENST00000319533 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms