RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 FLAD1Q8NFF5 587 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 RRP36Q96EU6 259 aaKnown RBP23.01■■□□□ 1.27
CPNE7-202ENST00000319518 NUDT12Q9BQG2 462 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 TSGA10Q9BZW7 698 aa23.01■■□□□ 1.27
CPNE7-202ENST00000319518 MYH10P35580 1976 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 A0A0U1RQG5 324 aaPredicted RBP23■■□□□ 1.27
CPNE7-202ENST00000319518 LCA5LO95447 670 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 ATP2B2Q01814 1243 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 SV2BQ7L1I2 683 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 TRIM58Q8NG06 486 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 DRC1Q96MC2 740 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 MTMR4Q9NYA4 1195 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 DMGDHQ9UI17 866 aaKnown RBP23■■□□□ 1.27
CPNE7-202ENST00000319518 FAM196BA6NMK8 535 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 RXRBP28702 533 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 MRPS25P82663 173 aaKnown RBP23■■□□□ 1.27
CPNE7-202ENST00000319518 UNC13DQ70J99 1090 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 ZNF572Q7Z3I7 529 aaPredicted RBP23■■□□□ 1.27
CPNE7-202ENST00000319518 AENQ8WTP8 325 aaKnown RBP23■■□□□ 1.27
CPNE7-202ENST00000319518 BAP1Q92560 729 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 CALML4Q96GE6 196 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 SMARCAL1Q9NZC9 954 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 SUGT1Q9Y2Z0 365 aa23■■□□□ 1.27
CPNE7-202ENST00000319518 LRRC53A6NM62 1247 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 IVLP07476 585 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 TCP10Q12799 353 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 LRRC55Q6ZSA7 311 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 KCNK18Q7Z418 384 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 REXO1Q8N1G1 1221 aaKnown RBP22.99■■□□□ 1.27
CPNE7-202ENST00000319518 MMGT1Q8N4V1 131 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 CCDC155Q8N6L0 562 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 AFAP1L1Q8TED9 768 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 TEKT1Q969V4 418 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 SLX4Q8IY92 1834 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 POTEMA6NI47 508 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 TDP2O95551 362 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 PDHBP11177 359 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 CRKP46108 304 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 SHROOM1Q2M3G4 852 aaPredicted RBP22.99■■□□□ 1.27
CPNE7-202ENST00000319518 NFRKBQ6P4R8 1299 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 LARP4BQ92615 738 aaKnown RBP22.99■■□□□ 1.27
CPNE7-202ENST00000319518 LRRC1Q9BTT6 524 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 EHD2Q9NZN4 543 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 SERPINB13Q9UIV8 391 aa22.99■■□□□ 1.27
CPNE7-202ENST00000319518 MAN2A1Q16706 1144 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 MMRN2Q9H8L6 949 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 H0YIN7 160 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 SHMT1P34896 483 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 NOVP48745 357 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 EHHADHQ08426 723 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 ASTE1Q2TB18 679 aaPredicted RBP22.98■■□□□ 1.27
CPNE7-202ENST00000319518 SOGA3Q5TF21 947 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 C10orf67Q8IYJ2 551 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 PSMB7Q99436 277 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 GPCPD1Q9NPB8 672 aa22.98■■□□□ 1.27
CPNE7-202ENST00000319518 SEC63Q9UGP8 760 aaKnown RBP22.98■■□□□ 1.27
CPNE7-202ENST00000319518 TACC1O75410 805 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 CXCR5P32302 372 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 FXR2P51116 673 aaKnown RBP eCLIP22.97■■□□□ 1.27
CPNE7-202ENST00000319518 CALCRLQ16602 461 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 QSER1Q2KHR3 1735 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 RRAGAQ7L523 313 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 GUF1Q8N442 669 aaKnown RBP22.97■■□□□ 1.27
CPNE7-202ENST00000319518 SPATA4Q8NEY3 305 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 OSBPL9Q96SU4 736 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 PLEKHA4Q9H4M7 779 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 PVALEFA0A1B0GWK0 134 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 ESYT2A0FGR8 921 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 USO1O60763 962 aaKnown RBP22.97■■□□□ 1.27
CPNE7-202ENST00000319518 COA7Q96BR5 231 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 IQCDQ96DY2 449 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 RIOX1Q9H6W3 641 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 STK17AQ9UEE5 414 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 SCN9AQ15858 1988 aa22.97■■□□□ 1.27
CPNE7-202ENST00000319518 MPHOSPH10O00566 681 aaKnown RBP22.96■■□□□ 1.27
CPNE7-202ENST00000319518 ECE2O60344 883 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 RBM5P52756 815 aaKnown RBP eCLIP22.96■■□□□ 1.27
CPNE7-202ENST00000319518 LRRC41Q15345 812 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 ECM1Q16610 540 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 HHIPL2Q6UWX4 724 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 TSPYL1Q9H0U9 437 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 NCK2O43639 380 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 PRLRP16471 622 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 HMGB2P26583 209 aaKnown RBP22.96■■□□□ 1.27
CPNE7-202ENST00000319518 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
CPNE7-202ENST00000319518 ITIH3Q06033 890 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 ANKRD13CQ8N6S4 541 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 PDGFDQ9GZP0 370 aaPredicted RBP22.96■■□□□ 1.27
CPNE7-202ENST00000319518 FAM184BQ9ULE4 1060 aa22.96■■□□□ 1.27
CPNE7-202ENST00000319518 IGKV6D-41A0A0C4DH26 115 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 SMARCA1P28370 1054 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 SLC7A5Q01650 507 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 KCNMA1Q12791 1236 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 ORC2Q13416 577 aaPredicted RBP22.95■■□□□ 1.26
CPNE7-202ENST00000319518 AOC3Q16853 763 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 HGSNATQ68CP4 663 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 PODNQ7Z5L7 613 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 RAD54LQ92698 747 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 MTMR8Q96EF0 704 aa22.95■■□□□ 1.26
CPNE7-202ENST00000319518 CRACR2AQ9BSW2 395 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms