RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 ETNPPLQ8TBG4 499 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 IWS1Q96ST2 819 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 PANK2Q9BZ23 570 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 JADE2Q9NQC1 790 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 UBIAD1Q9Y5Z9 338 aa17.41■□□□□ 0.38
PDLIM5-202ENST00000318007 IPO5O00410 1097 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 FKTNO75072 461 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 ELNP15502 786 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 LY6KQ17RY6 165 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 GJC2Q5T442 439 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 EPSTI1Q96J88 318 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 KCNMB3Q9NPA1 279 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 TELO2Q9Y4R8 837 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 EDNRBP24530 442 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SETQ01105 290 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SP2Q02086 613 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 ITGB3BPQ13352 177 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 LRCH2Q5VUJ6 765 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 TRMT1LQ7Z2T5 733 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 JMYQ8N9B5 988 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 INPP4AQ96PE3 977 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 PLIN2Q99541 437 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 MPHOSPH6Q99547 160 aaKnown RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 APBA2Q99767 749 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 CFHR5Q9BXR6 569 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 SLC5A4Q9NY91 659 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 DOCK5Q9H7D0 1870 aa17.4■□□□□ 0.38
PDLIM5-202ENST00000318007 ASB14A6NK59 587 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 PPP6R2O75170 966 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 ARIH2O95376 493 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 NCAPH2Q6IBW4 605 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 SHC4Q6S5L8 630 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 MOXD1Q6UVY6 613 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 TEX2Q8IWB9 1127 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 PDILTQ8N807 584 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 MBOAT7Q96N66 472 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 NAP1L4Q99733 375 aaKnown RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 KIAA1217Q5T5P2 1943 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 GAS7O60861 476 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 BMP15O95972 392 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 TRIM32Q13049 653 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 NLRX1Q86UT6 975 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 TRIB2Q92519 343 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 USP6NLQ92738 828 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 COPS5Q92905 334 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 LENG1Q96BZ8 264 aaPredicted RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 GOLPH3LQ9H4A5 285 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 AGO4Q9HCK5 861 aaKnown RBP17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 TRIM17Q9Y577 477 aa17.39■□□□□ 0.37
PDLIM5-202ENST00000318007 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 ADCYAP1R1P41586 468 aa17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 CYFIP1Q7L576 1253 aa17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 ELP1O95163 1332 aa17.38■□□□□ 0.37
PDLIM5-202ENST00000318007 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 B4DLN1 442 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 TMEM266Q2M3C6 531 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 MKI67P46013 3256 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 A0A087WWV3 80 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 LAD1O00515 517 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 LIG1P18858 919 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 SLFN12Q8IYM2 578 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 GPT2Q8TD30 523 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 GPRASP2Q96D09 838 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 ERO1AQ96HE7 468 aa17.37■□□□□ 0.37
PDLIM5-202ENST00000318007 ZNF236Q9UL36 1845 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 CUTAO60888 179 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 TXNP10599 105 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 UBA1P22314 1058 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 NDUFA8P51970 172 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 UBE2HP62256 183 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 CYP4A11Q02928 519 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 ARL6IP4Q66PJ3 421 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 ADALQ6DHV7 355 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 XRRA1Q6P2D8 792 aa17.36■□□□□ 0.37
PDLIM5-202ENST00000318007 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms