RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 MFSD10Q14728 455 aa20.45■□□□□ 0.86
TPM1-203ENST00000317516 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
TPM1-203ENST00000317516 CMTR1Q8N1G2 835 aaKnown RBP20.45■□□□□ 0.86
TPM1-203ENST00000317516 MYLIPQ8WY64 445 aa20.45■□□□□ 0.86
TPM1-203ENST00000317516 INPP4AQ96PE3 977 aaPredicted RBP20.45■□□□□ 0.86
TPM1-203ENST00000317516 ALG1Q9BT22 464 aa20.45■□□□□ 0.86
TPM1-203ENST00000317516 RBM28Q9NW13 759 aaKnown RBP20.45■□□□□ 0.86
TPM1-203ENST00000317516 GTF2IRD1Q9UHL9 959 aa20.45■□□□□ 0.86
TPM1-203ENST00000317516 MEIS2O14770 477 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 FIBPO43427 364 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 PARNO95453 639 aaKnown RBP20.44■□□□□ 0.86
TPM1-203ENST00000317516 FOSL2P15408 326 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 UBA1P22314 1058 aaKnown RBP20.44■□□□□ 0.86
TPM1-203ENST00000317516 ICAM3P32942 547 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 MRPS9P82933 396 aaKnown RBP20.44■□□□□ 0.86
TPM1-203ENST00000317516 SP2Q02086 613 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 KIAA0753Q2KHM9 967 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 HSDL1Q3SXM5 330 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 USP17L6PQ6QN14 398 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 MICU3Q86XE3 530 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 CCDC82Q8N4S0 544 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
TPM1-203ENST00000317516 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
TPM1-203ENST00000317516 RTEL1Q9NZ71 1219 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 HDAC6Q9UBN7 1215 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
TPM1-203ENST00000317516 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 HAS3O00219 553 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 NOP56O00567 594 aaKnown RBP20.43■□□□□ 0.86
TPM1-203ENST00000317516 ZNF286BP0CG31 522 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 EXOSC10Q01780 885 aaKnown RBP20.43■□□□□ 0.86
TPM1-203ENST00000317516 COL9A3Q14050 684 aaPredicted RBP20.43■□□□□ 0.86
TPM1-203ENST00000317516 GRIN2CQ14957 1233 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 PCNX4Q63HM2 1172 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 NLRX1Q86UT6 975 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 AFAP1L1Q8TED9 768 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 SLC28A3Q9HAS3 691 aa20.43■□□□□ 0.86
TPM1-203ENST00000317516 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
TPM1-203ENST00000317516 SORBS3O60504 671 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 PBX2P40425 430 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 FGD1P98174 961 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 METTL7BQ6UX53 244 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 MAFAQ8NHW3 353 aaPredicted RBP20.42■□□□□ 0.86
TPM1-203ENST00000317516 USP26Q9BXU7 913 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 SCN10AQ9Y5Y9 1956 aa20.42■□□□□ 0.86
TPM1-203ENST00000317516 BAZ2BQ9UIF8 2168 aaKnown RBP20.42■□□□□ 0.86
TPM1-203ENST00000317516 MYH6P13533 1939 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 ZBTB43O43298 467 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 SELPP16109 830 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 ATP2A2P16615 1042 aaKnown RBP20.41■□□□□ 0.86
TPM1-203ENST00000317516 PTK7Q13308 1070 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 GIMAP8Q8ND71 665 aaPredicted RBP20.41■□□□□ 0.86
TPM1-203ENST00000317516 GPKOWQ92917 476 aaPredicted RBP eCLIP20.41■□□□□ 0.86
TPM1-203ENST00000317516 VWCEQ96DN2 955 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 CDHR1Q96JP9 859 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 SENP7Q9BQF6 1050 aa20.41■□□□□ 0.86
TPM1-203ENST00000317516 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 H3BRB1 525 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 RBL2Q08999 1139 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 RTN1Q16799 776 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 LRRC8DQ7L1W4 858 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 CYFIP1Q7L576 1253 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 HEATR3Q7Z4Q2 680 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 TEX2Q8IWB9 1127 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 PHOSPHO2Q8TCD6 241 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 GAS2L1Q99501 681 aaPredicted RBP20.4■□□□□ 0.86
TPM1-203ENST00000317516 C16orf70Q9BSU1 422 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 TUT1Q9H6E5 874 aaKnown RBP20.4■□□□□ 0.86
TPM1-203ENST00000317516 EHMT1Q9H9B1 1298 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 PCDHA11Q9Y5I1 949 aa20.4■□□□□ 0.86
TPM1-203ENST00000317516 hCG_1642624A0A1W2PR95 340 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 DLL1O00548 723 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 ADCK5Q3MIX3 580 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.39■□□□□ 0.85
TPM1-203ENST00000317516 TCEANC2Q96MN5 208 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 CTAGE1Q96RT6 745 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 SLC9A7Q96T83 725 aa20.39■□□□□ 0.85
TPM1-203ENST00000317516 COL6A3P12111 3177 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 BAIAP3O94812 1187 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 LGALS2P05162 132 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 NEFLP07196 543 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 CKBP12277 381 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 RCAN1P53805 252 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 GPRASP2Q96D09 838 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 NKX2-4Q9H2Z4 354 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
TPM1-203ENST00000317516 V9GY48 417 aaPredicted RBP20.38■□□□□ 0.85
TPM1-203ENST00000317516 KLF18A0A0U1RQI7 1052 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 CCDC196A0A1B0GTZ2 297 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 GOLGA8AA7E2F4 631 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 GOLGA8BA8MQT2 603 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 MAFGO15525 162 aa20.37■□□□□ 0.85
TPM1-203ENST00000317516 REC8O95072 547 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms