RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 IQCEQ6IPM2 695 aa16.58■□□□□ 0.24
CHFR-202ENST00000315585 SNX29Q8TEQ0 813 aa16.58■□□□□ 0.24
CHFR-202ENST00000315585 RAD54LQ92698 747 aa16.58■□□□□ 0.24
CHFR-202ENST00000315585 EDEM3Q9BZQ6 932 aa16.58■□□□□ 0.24
CHFR-202ENST00000315585 TTYH3Q9C0H2 523 aa16.58■□□□□ 0.24
CHFR-202ENST00000315585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.244e-18■■■■■ 49.5
CHFR-202ENST00000315585 ZBTB5O15062 677 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 SLC1A4P43007 532 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 GRB10Q13322 594 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 PUF60Q9UHX1 559 aaKnown RBP16.57■□□□□ 0.24
CHFR-202ENST00000315585 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 PLA2G4AP47712 749 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 VWA3BQ502W6 1294 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 HDXQ7Z353 690 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 GMCL1P1Q8NEA9 526 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 COA7Q96BR5 231 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 CCDC42Q96M95 316 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 ACBD3Q9H3P7 528 aa16.57■□□□□ 0.24
CHFR-202ENST00000315585 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
CHFR-202ENST00000315585 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 HNRNPH3P31942 346 aaKnown RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 CXCL9Q07325 125 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 PSTPIP2Q9H939 334 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 BLOC1S4Q9NUP1 217 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 SAR1BQ9Y6B6 198 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 FAM196BA6NMK8 535 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 FCER1AP12319 257 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 RPS12P25398 132 aaKnown RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 TNNI2P48788 182 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 LONRF2Q1L5Z9 754 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 WDR59Q6PJI9 974 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 KIAA0895Q8NCT3 520 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 JAKMIP2Q96AA8 810 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 SLC39A2Q9NP94 309 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 PPP1R1BQ9UD71 204 aaPredicted RBP16.56■□□□□ 0.24
CHFR-202ENST00000315585 PCDHA12Q9UN75 941 aa16.56■□□□□ 0.24
CHFR-202ENST00000315585 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 MYMKA6NI61 221 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 GNA14O95837 355 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 CLK2P49760 499 aaKnown RBP16.55■□□□□ 0.24
CHFR-202ENST00000315585 USP11P51784 963 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 MCM6Q14566 821 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 SMC1AQ14683 1233 aaKnown RBP16.55■□□□□ 0.24
CHFR-202ENST00000315585 TMEM119Q4V9L6 283 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 NDST4Q9H3R1 872 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 PLAGL2Q9UPG8 496 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 COL4A5P29400 1685 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 FER1L6Q2WGJ9 1857 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 TBC1D12O60347 775 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 AMPD2Q01433 879 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 TRAPPC11Q7Z392 1133 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 VEZTQ9HBM0 779 aa16.55■□□□□ 0.24
CHFR-202ENST00000315585 GDF11O95390 407 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 IDEP14735 1019 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 MAP9Q49MG5 647 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 PAPD7Q5XG87 772 aaKnown RBP16.54■□□□□ 0.24
CHFR-202ENST00000315585 CCDC70Q6NSX1 233 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 DDX12PQ92771 950 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 FUT8Q9BYC5 575 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 SEMA6BQ9H3T3 888 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 REXO2Q9Y3B8 237 aaKnown RBP16.54■□□□□ 0.24
CHFR-202ENST00000315585 SLC37A4O43826 429 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 RAD21O60216 631 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 TDP2O95551 362 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 GH2P01242 217 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 FKBP3Q00688 224 aaKnown RBP16.54■□□□□ 0.24
CHFR-202ENST00000315585 HYIQ5T013 277 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 MOXD1Q6UVY6 613 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 CCDC65Q8IXS2 484 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 SLFN12Q8IYM2 578 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 UBXN6Q9BZV1 441 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 ANKZF1Q9H8Y5 726 aa16.54■□□□□ 0.24
CHFR-202ENST00000315585 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
CHFR-202ENST00000315585 F5H6K3 240 aa16.53■□□□□ 0.24
CHFR-202ENST00000315585 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms