RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 MAF1Q9H063 256 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 EXOC1Q9NV70 894 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 GDAQ9Y2T3 454 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 MED24O75448 989 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PSMD10O75832 226 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 BCRP11274 1271 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PPP1R2P41236 205 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 STX17P56962 302 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PAK1Q13153 545 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 PCNX4Q63HM2 1172 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 SNRNP48Q6IEG0 339 aaKnown RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 OTOP1Q7RTM1 612 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 NIPA1Q7RTP0 329 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 CATSPER3Q86XQ3 398 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 BMP2KQ9NSY1 1161 aaPredicted RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 RNF146Q9NTX7 359 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 ZNF214Q9UL59 606 aaPredicted RBP18.72■□□□□ 0.59
CLCF1-201ENST00000312438 RIPK3Q9Y572 518 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 SYNRGQ9UMZ2 1314 aa18.72■□□□□ 0.59
CLCF1-201ENST00000312438 UTRNP46939 3433 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 CXCL11O14625 94 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 HOXA7P31268 230 aaPredicted RBP18.71■□□□□ 0.59
CLCF1-201ENST00000312438 TTLL12Q14166 644 aaPredicted RBP18.71■□□□□ 0.59
CLCF1-201ENST00000312438 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 LRCH2Q5VUJ6 765 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 UNC13DQ70J99 1090 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 TAAR1Q96RJ0 339 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 ZNF577Q9BSK1 485 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 POLR3CQ9BUI4 534 aaPredicted RBP18.71■□□□□ 0.59
CLCF1-201ENST00000312438 TEX13BQ9BXU2 312 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
CLCF1-201ENST00000312438 NRBP1Q9UHY1 535 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 CTNND2Q9UQB3 1225 aa18.71■□□□□ 0.59
CLCF1-201ENST00000312438 POTEB3A0JP26 581 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 POTECB2RU33 542 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 PPP2R5CQ13362 524 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 POTEBQ6S5H4 581 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 NSMFQ6X4W1 530 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 NELFBQ8WX92 580 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 CNKSR2Q8WXI2 1034 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 DDX12PQ92771 950 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 ZNF830Q96NB3 372 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 FRMPD4Q14CM0 1322 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 E9PMD0 336 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 GAS7O60861 476 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 PLA2G4BP0C869 781 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 SPATA31C1P0DKV0 1188 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 ARP10275 920 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 ITGB5P18084 799 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 ARMC9Q7Z3E5 817 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 DHTKD1Q96HY7 919 aaPredicted RBP18.7■□□□□ 0.58
CLCF1-201ENST00000312438 RIT2Q99578 217 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 DNM3Q9UQ16 869 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 MAPK8IP1Q9UQF2 711 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 UBIAD1Q9Y5Z9 338 aa18.7■□□□□ 0.58
CLCF1-201ENST00000312438 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 PSMA7O14818 248 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 IRF6O14896 467 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 PTGS1P23219 599 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 PSMD2Q13200 908 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 BAATQ14032 418 aaPredicted RBP18.69■□□□□ 0.58
CLCF1-201ENST00000312438 COBLL1Q53SF7 1204 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 DYMQ7RTS9 669 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 RMDN3Q96TC7 470 aa18.69■□□□□ 0.58
CLCF1-201ENST00000312438 EIF2AK1Q9BQI3 630 aaKnown RBP18.69■□□□□ 0.58
CLCF1-201ENST00000312438 A0A0G2JLL6 359 aaPredicted RBP18.68■□□□□ 0.58
CLCF1-201ENST00000312438 IPO5O00410 1097 aaKnown RBP18.68■□□□□ 0.58
CLCF1-201ENST00000312438 STK4Q13043 487 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 PGM5Q15124 567 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 TREML2Q5T2D2 321 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 ARHGEF16Q5VV41 709 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 CDKAL1Q5VV42 579 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 XRRA1Q6P2D8 792 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 SLC30A10Q6XR72 485 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 MOB2Q70IA6 237 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 PRRT2Q7Z6L0 340 aaPredicted RBP18.68■□□□□ 0.58
CLCF1-201ENST00000312438 OTUD5Q96G74 571 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
CLCF1-201ENST00000312438 CLMNQ96JQ2 1002 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 NAP1L5Q96NT1 182 aaPredicted RBP18.68■□□□□ 0.58
CLCF1-201ENST00000312438 HSD17B14Q9BPX1 270 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 JADE2Q9NQC1 790 aa18.68■□□□□ 0.58
CLCF1-201ENST00000312438 EML1O00423 815 aa18.67■□□□□ 0.58
CLCF1-201ENST00000312438 SSBP05455 408 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLCF1-201ENST00000312438 EIF2AK2P19525 551 aaKnown RBP18.67■□□□□ 0.58
CLCF1-201ENST00000312438 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
CLCF1-201ENST00000312438 HSP90AA4PQ58FG1 418 aa18.67■□□□□ 0.58
CLCF1-201ENST00000312438 PDCD2LQ9BRP1 358 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms