RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SERPING1P05155 500 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 PPP1R2P3Q6NXS1 205 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 METTL13Q8N6R0 699 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 ELAC2Q9BQ52 826 aaKnown RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 USP40Q9NVE5 1235 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 NFU1Q9UMS0 254 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 PCDHB4Q9Y5E5 795 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 S100BP04271 92 aaPredicted RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 PDCLQ13371 301 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 KRT82Q9NSB4 513 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 DCTN3O75935 186 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 FOSP01100 380 aaPredicted RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 HSPA8P11142 646 aaKnown RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 DNAJC10Q8IXB1 793 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 THAP9Q9H5L6 903 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 KAT6BQ8WYB5 2073 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 TTI1O43156 1089 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 CYP21A2P08686 494 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 KPNA2P52292 529 aaKnown RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 GYS2P54840 703 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 GRAMD1CQ8IYS0 662 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 ANO3Q9BYT9 981 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 TLK1Q9UKI8 766 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 THRAP3Q9Y2W1 955 aaKnown RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
CLCN6-201ENST00000312413 SRGAP2BP0DMP2 458 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 ACTN1P12814 892 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 GAP43P17677 238 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 TRAIPQ9BWF2 469 aa14.81□□□□□ -0.04
CLCN6-201ENST00000312413 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ANKRD65E5RJM6 399 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 CYP27A1Q02318 531 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 SLFNL1Q499Z3 407 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 LCA5Q86VQ0 697 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 SMCR8Q8TEV9 937 aaPredicted RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 MLXIPQ9HAP2 919 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 GJA3Q9Y6H8 435 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 KRT1P04264 644 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 CCNE1P24864 410 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 BASP1P80723 227 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 SLC17A8Q8NDX2 589 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 FAM81BQ96LP2 452 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 FTOQ9C0B1 505 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 MRPL47Q9HD33 250 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 DISC1Q9NRI5 854 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 PCDHA4Q9UN74 947 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ABCC10Q5T3U5 1492 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 WDR91A4D1P6 747 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 LRRN2O75325 713 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 PABPC4Q13310 644 aaKnown RBP eCLIP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 BIRC2Q13490 618 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 LRRC41Q15345 812 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 GLE1Q53GS7 698 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 CCDC188H7C350 402 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 SPAG7O75391 227 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ATP10BO94823 1461 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 NCF2P19878 526 aaPredicted RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 RPS8P62241 208 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ATG16L1Q676U5 607 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 PCGF5Q86SE9 256 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 SYT2Q8N9I0 419 aaPredicted RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 FGD4Q96M96 766 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 UPF3AQ9H1J1 476 aaKnown RBP14.8□□□□□ -0.04
CLCN6-201ENST00000312413 MID2Q9UJV3 735 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 PLAAQ9Y263 795 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 ANGPTL3Q9Y5C1 460 aa14.8□□□□□ -0.04
CLCN6-201ENST00000312413 HNRNPDLO14979 420 aaKnown RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CFLARO15519 480 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 GFPT2O94808 682 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 MFSD14BQ5SR56 506 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ZMYM1Q5SVZ6 1142 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 MAML1Q92585 1016 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ATP6V1E2Q96A05 226 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CYTH2Q99418 400 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 LRRIQ4A6NIV6 560 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ZBBXA8MT70 800 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CREB3O43889 395 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 MMEP08473 750 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ALAS1P13196 640 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CC2D1AQ6P1N0 951 aaPredicted RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 NBPF10Q6P3W6 841 aaKnown RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 AP1M1Q9BXS5 423 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CCNL1Q9UK58 526 aaPredicted RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 IPO5O00410 1097 aaKnown RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 GSTA4O15217 222 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 LLGL1Q15334 1064 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 UNC5CLQ8IV45 518 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 MFAP3LO75121 409 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 ATP5HO75947 161 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CEP70Q8NHQ1 597 aa14.79□□□□□ -0.04
CLCN6-201ENST00000312413 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
CLCN6-201ENST00000312413 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms