RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ODR4Q5SWX8 454 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 FBXO11Q86XK2 927 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 POMGNT1Q8WZA1 660 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 ALDH8A1Q9H2A2 487 aaPredicted RBP14.28□□□□□ -0.12
SNED1-201ENST00000310397 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 FRMD3A2A2Y4 597 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 MAP3K7O43318 606 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 PPM1FP49593 454 aaPredicted RBP14.28□□□□□ -0.12
SNED1-201ENST00000310397 NXNQ6DKJ4 435 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 NT5C1BQ96P26 610 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 CENPKQ9BS16 269 aa14.28□□□□□ -0.12
SNED1-201ENST00000310397 TMEM2Q9UHN6 1383 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 GNPTABQ3T906 1256 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 TOGARAM2Q6ZUX3 1019 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 TEKT3Q9BXF9 490 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 ST7Q9NRC1 585 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 MED14O60244 1454 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 CLTCL1P53675 1640 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 FAM102BQ5T8I3 360 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 KAZNQ674X7 775 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 TRIM50Q86XT4 487 aa14.27□□□□□ -0.12
SNED1-201ENST00000310397 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.12
SNED1-201ENST00000310397 USP6P35125 1406 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 FRMPD2Q68DX3 1309 aaPredicted RBP14.27□□□□□ -0.13
SNED1-201ENST00000310397 LGALS16A8MUM7 142 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 MGEA5O60502 916 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 EFHD1Q9BUP0 239 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 POLR2MP0CAP2 368 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 SATB1Q01826 763 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 FAM133AQ8N9E0 248 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 PCDHA1Q9Y5I3 950 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 IPO5O00410 1097 aaKnown RBP14.27□□□□□ -0.13
SNED1-201ENST00000310397 KRT3P12035 628 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 PTPREP23469 700 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 TOB2Q14106 344 aaPredicted RBP14.27□□□□□ -0.13
SNED1-201ENST00000310397 ARID5BQ14865 1188 aa14.27□□□□□ -0.13
SNED1-201ENST00000310397 PLCG1P19174 1290 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 MMEL1Q495T6 779 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 FAM133BQ5BKY9 247 aaKnown RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 MRFAP1Q9Y605 127 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 ANKRD20A8PQ5CZ79 823 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 ANKRD20A2Q5SQ80 823 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 ANKRD20A1Q5TYW2 823 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 MSH2P43246 934 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 ZNF653Q96CK0 615 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 TTC36A6NLP5 189 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 FTCDO95954 541 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 BSPRYQ5W0U4 402 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 EXOC1LA0A1B0GW35 172 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 TNNC2P02585 160 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 UIMC1Q96RL1 719 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 GGCXP38435 758 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 GYG1P46976 350 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 BRDTQ58F21 947 aaPredicted RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 RIOK1Q9BRS2 568 aaKnown RBP14.26□□□□□ -0.13
SNED1-201ENST00000310397 ZFYVE16Q7Z3T8 1539 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 RCAN1P53805 252 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 GREM2Q9H772 168 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 AFG3L2Q9Y4W6 797 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 CD2APQ9Y5K6 639 aa14.26□□□□□ -0.13
SNED1-201ENST00000310397 NCAPD2Q15021 1401 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 CDC42BPGQ6DT37 1551 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 NR1H3Q13133 447 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 TAF12Q16514 161 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 PIK3CAP42336 1068 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 CCDC17Q96LX7 622 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 CAPN12Q6ZSI9 719 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 OSBP2Q969R2 916 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 PLAAQ9Y263 795 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 AMNQ9BXJ7 453 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 GMNCA6NCL1 334 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 MCF2LO15068 1137 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 TADA3O75528 432 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 YWHAGP61981 247 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNED1-201ENST00000310397 DHX40Q8IX18 779 aaKnown RBP14.25□□□□□ -0.13
SNED1-201ENST00000310397 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 MADDQ8WXG6 1647 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 MMEP08473 750 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 ASPHQ12797 758 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 TTBK2Q6IQ55 1244 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 ZBTB8OSQ8IWT0 167 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
SNED1-201ENST00000310397 VIRMAQ69YN4 1812 aaKnown RBP14.24□□□□□ -0.13
SNED1-201ENST00000310397 COBLO75128 1261 aa14.24□□□□□ -0.13
SNED1-201ENST00000310397 TCP10Q12799 353 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms